Transcriptomics‐guided identification of an algicidal protease of the marine bacterium Kordia algicida OT‐1

TitleTranscriptomics‐guided identification of an algicidal protease of the marine bacterium Kordia algicida OT‐1
Publication TypeJournal Article
Year of Publication2023
AuthorsSyhapanha KS, Russo DA, Deng Y, Meyer N, Poulin RX, Pohnert G
JournalMicrobiologyOpen
Volume12
Paginatione1387
ISSN2045-8827
KeywordsRCC75
Abstract

In recent years, interest in algicidal bacteria has risen due to their ecological importance and their potential as biotic regulators of harmful algal blooms. Algicidal bacteria shape the plankton communities of the oceans by inhibiting or lysing microalgae and by consuming the released nutrients. Kordia algicida strain OT‐1 is a model marine algicidal bacterium that was isolated from a bloom of the diatom Skeletonema costatum. Previous work has suggested that algicidal activity is mediated by secreted proteases. Here, we utilize a transcriptomics‐guided approach to identify the serine protease gene KAOT1_RS09515, hereby named alpA1 as a key element in the algicidal activity of K. algicida. The protease AlpA1 was expressed and purified from a heterologous host and used in in vitro bioassays to validate its activity. We also show that K. algicida is the only algicidal species within a group of four members of the Kordia genus. The identification of this algicidal protease opens the possibility of real‐time monitoring of the ecological impact of algicidal bacteria in natural phytoplankton blooms., Algicidal bacteria shape the plankton communities of the oceans by lysing microalgae and consuming the released nutrients. Kordia algicida is an environmentally relevant marine bacterium whose algicidal activity is mediated by secreted proteases. In this study, we utilize a transcriptomics‐guided approach to identify the secreted serine protease AlpA1 as a key factor in the algicidal process. This discovery offers new approaches for the real‐time monitoring and manipulation of algicidal bacteria in algal blooms.

URLhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10565126/
DOI10.1002/mbo3.1387