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Marine Synechococcus

These strains are being characterized. Clade corresponds to 16S rRNA phylogeny.

This shortlist returns 417 RCC strains

Title Genus Strain name Clade Phenotype pigment Sampling ocean Sampling station Sampling depth (m) Distributed
RCC27 Synechococcus WH7803SynBB subcluster 5.1 - clade V Syn type 3a Atlantic Ocean 25
RCC28 Synechococcus WH7803Syn subcluster 5.1 - clade V Syn type 3a Atlantic Ocean 25
RCC29 Synechococcus WH8103Syn subcluster 5.1 - clade IIIa Syn type 3c' Atlantic Ocean
RCC30 Synechococcus MAX42Syn subcluster 5.1 - clade IIIc Syn type 3c' Atlantic Ocean 120
RCC31 Synechococcus MAX01Syn Syn type 3c Atlantic Ocean 0
RCC32 Synechococcus ROS8604 Syn subcluster 5.1 - clade Ib Syn type 3a Atlantic Ocean Roscoff Estacade 0
RCC33 Synechococcus EUM Syn10 Syn type 3c Atlantic Ocean OLIGO 110
RCC34 Synechococcus EUM Syn11 Syn type 3c Atlantic Ocean OLIGO 20
RCC35 Synechococcus EUM Syn12 Syn type 3c Atlantic Ocean OLIGO 80
RCC36 Synechococcus EUM Syn13 Syn type 3c Atlantic Ocean OLIGO 120
RCC37 Synechococcus EUM Syn14 subcluster 5.1 - clade IIIa Syn type 3c Atlantic Ocean OLIGO 105
RCC38 Synechococcus EUM Syn15 Syn type 3c Atlantic Ocean OLIGO 80
RCC39 Synechococcus EUM Syn16 Syn type 3c Atlantic Ocean OLIGO 105
RCC40 Synechococcus EUM Syn17 Syn type 3c Atlantic Ocean T3 30
RCC41 Synechococcus EUM Syn18 Syn type 3c Atlantic Ocean T3 80
RCC42 Synechococcus MEDNS5 subcluster 5.1 - clade Via Syn type 3c Mediterranean Sea MA1 80
RCC43 Synechococcus ALMO3 Syn subcluster 5.1 - clade Ib Syn type 3a Mediterranean Sea 0
RCC44 Synechococcus OLI031FJ Syn subcluster 5.1 - clade IIIa Syn type 3c Pacific Ocean 6 70
RCC45 Synechococcus MINSyn016-15m-01-A subcluster 5.3 Syn type 3d Mediterranean Sea 3 15
RCC46 Synechococcus MINSyn016-15m-01-B subcluster 5.1 - clade X Syn type 3d Mediterranean Sea 3 15
RCC47 Synechococcus MINSyn018-15m-02 subcluster 5.1 - clade III Syn type 3c Mediterranean Sea 3 15
RCC48 Synechococcus MINSyn018-15m-03 Syn type 3c Mediterranean Sea 3 15
RCC49 Synechococcus MINSyn038-5m-04-A Syn type 3c Mediterranean Sea 7 5
RCC50 Synechococcus MINSyn038-5m-04-B Syn type 3c Mediterranean Sea 7 5
RCC51 Synechococcus MINSyn047-20m-05-A Syn type 3c Mediterranean Sea 9 20
RCC52 Synechococcus MINSyn047-20m-05-B Syn type 3c Mediterranean Sea 9 20
RCC53 Synechococcus MINSyn052-10m-06-A Syn type 3c Mediterranean Sea 10 10
RCC54 Synechococcus MINSyn052-10m-07-B Syn type 3c Mediterranean Sea 10 10
RCC55 Synechococcus MINSyn052-70m-08-A Syn type 3d Mediterranean Sea 10 70
RCC56 Synechococcus MINSyn052-70m-08-B Syn type 3d Mediterranean Sea 10 70
RCC57 Synechococcus MINSyn052-70m-08-A Syn type 3c Mediterranean Sea 10 70
RCC58 Synechococcus MINSyn052-70m-08-B Syn type 3c Mediterranean Sea 10 70
RCC59 Synechococcus MINSyn059-10m-09 Syn type 3c Mediterranean Sea 11 10
RCC60 Synechococcus MINSyn057-10m-10 Syn type 3c Mediterranean Sea 11 10
RCC61 Synechococcus MINSyn129-20m-11-A subcluster 5.3 Syn type 3d Mediterranean Sea 17 20
RCC62 Synechococcus MINSyn129-20m-12-B subcluster 5.1 - clade IIIa Syn type 3c Mediterranean Sea 17 20
RCC64 Synechococcus PCC7942 ANR2spc Syn type 1 inland
RCC65 Synechococcus NOUM97001 Syn type 3c Pacific Ocean 120
RCC66 Synechococcus NOUM97010 subcluster 5.1 - clade CRD1b Syn type 3c Pacific Ocean 30
RCC67 Synechococcus NOUM97012 subcluster 5.1 - clade VII Syn type 3a Pacific Ocean 80
RCC68 Synechococcus NOUM97013 Syn type 3a Pacific Ocean 0
RCC262 Synechococcus TAK9802 subcluster 5.1 - clade IIa Syn type 3a Pacific Ocean 7
RCC263 Synechococcus TAK9803-1 Syn type 3a Pacific Ocean 20
RCC307 Synechococcus MINSyn016-15m-01-AC6A1 subcluster 5.3 Syn type 3b Mediterranean Sea 3 15
RCC308 Synechococcus MINSyn016-15m-01-AC6B1 Syn type 3b Mediterranean Sea 3 15
RCC309 Synechococcus MINSyn016-15m-01-AC6F1 subcluster 5.1 - clade X Syn type 3b Mediterranean Sea 3 15
RCC310 Synechococcus MINSyn018-15m-02-C2C1 Syn type 3b Mediterranean Sea 3 15
RCC311 Synechococcus MINSyn018-15m-02-C2C2 subcluster 5.1 - clade III Syn type 3b Mediterranean Sea 3 15
RCC312 Synechococcus MINSyn018-15m-02-C2C3 Syn type 3c Mediterranean Sea 3 15
RCC313 Synechococcus MINSyn018-15m-02-C2B1 Syn type 3c Mediterranean Sea 3 15