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RCC5583

Thalassiosira_sp

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  • D. Saenz - SEM - Phenom Pro
  • D. Saenz - SEM - Phenom Pro
  • D. Saenz - SEM - Phenom Pro
  • D. Saenz - Direct microscope - Nikon eclipse - x100
  • D. Saenz - Direct microscope - Nikon eclipse - x100
  • D. Saenz - Direct microscope - Nikon eclipse - x100
  • D. Saenz - Direct microscope - Nikon eclipse - x100

Exclusive Economic Zones (EEZs) are indicated on the map.

ABS compliance

ABS = Access & Benefit Sharing according to the Nagoya Protocol to the Convention for Biological Diversity (find out more here)
ABS status: Information available soon.
IDENTITY

Thalassiosira_sp

Domain: 
Eukaryota
Division: 
Heterokontophyta
Class: 
Mediophyceae
Order: 
Thalassiosirales
Family: 
Thalassiosiraceae
Genus: 
Thalassiosira
Strain name: 
GE_AL_AM_SORT_539
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
MORPHOLOGY
Cell assemblage: 
chains
Cell shape: 
cylindrical
Length: 
10.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Arctic Ocean
Sampling regional sea: 
Baffin Bay
Sampling country: 
Canada
Sampling substrate: 
water
Sampling water type: 
marine
Sampling ecosystem: 
pelagic
Sampling cruise: 
Green Edge Amundsen
Sampling station: 
G600
Sampling depth (m): 
20
Sampling date: 
Sunday, July 3, 2016
Isolation by: 
A. Lopes
Isolation method: 
Cell sorting
CULTURE CONDITIONS
RCC medium: 
L1
RCC temperature: 
4.00
RCC transfer period weeks: 
4.00
RCC light: 
100

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
MH765020 18S rRNA nucleus Thalassiosira sp. RCC5583 Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira Thalassiosira sp. RCC5583 small subunit ribosomal RNA gene, partial sequence
MN834004 ITS rRNA nucleus Thalassiosira sp. Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; unclassified Thalassiosira Thalassiosira sp. strain RCC5583 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence

Associated references

Displaying 1 - 2 of 2
Ribeiro CGérikas, Santos ALopes dos, Gourvil P, Le Gall F, Marie D, Tragin M, Probert I, Vaulot D.  2019.  Culturable diversity of Arctic phytoplankton during pack ice melting. bioRxiv. :642264. PDF icon Download pdf (16.96 MB)
Ribeiro CGérikas, Santos ALopes dos, Gourvil P, Le Gall F, Marie D, Tragin M, Probert I, Vaulot D.  2020.  Culturable diversity of Arctic phytoplankton during pack ice melting. Elementa: Science of the Anthropocene. 8:6. PDF icon Download pdf (6.82 MB)