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RCC2705

Thalassiosira_sp

Distributed

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ABS compliance

ABS = Access & Benefit Sharing according to the Nagoya Protocol to the Convention for Biological Diversity (find out more here)

ABS status: Compliant without conditions
ABS compliance details: No ABS permit needed : sampled pre-NP (no national legislation)
IDENTITY

Thalassiosira_sp

Domain: 
Eukaryota
Division: 
Heterokontophyta
Class: 
Mediophyceae
Order: 
Thalassiosirales
Family: 
Thalassiosiraceae
Genus: 
Thalassiosira
Strain name: 
Fildes Bay S3 DV N5
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Length: 
6.00
ORIGIN
Sampling ocean: 
Southern Ocean
Sampling regional sea: 
Bransfield Strait
Sampling site: 
Fildes Bay
Sampling country: 
Antarctica
Sampling ecosystem: 
coastal
Sampling cruise: 
Fildes Bay 2011
Sampling depth (m): 
0
Sampling date: 
Wednesday, January 26, 2011
CULTURE CONDITIONS
RCC medium: 
RCC temperature: 
4.00
RCC transfer period weeks: 
2.00
RCC light: 
50
Remark: 
This strain was misidentified until Jan 2013 as Porosira.

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
JQ995470 28S rRNA nucleus Thalassiosira sp. SB-2012 Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira Thalassiosira sp. SB-2012 strain RCC2705 28S ribosomal RNA gene, partial sequence
KT861214 18S rRNA nucleus Thalassiosira sp. RCC2705 Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; unclassified Thalassiosira Thalassiosira sp. RCC2705 isolate ZZ0044863 18S ribosomal RNA gene, partial sequence
MH843500 28S rRNA nucleus Thalassiosira sp. RCC2705 Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; unclassified Thalassiosira Thalassiosira sp. RCC2705 large subunit ribosomal RNA gene, partial sequence
MH843515 ITS rRNA nucleus Thalassiosira sp. RCC2705 Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; unclassified Thalassiosira Thalassiosira sp. RCC2705 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence
MH843666 18S rRNA nucleus Thalassiosira sp. Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; unclassified Thalassiosira Thalassiosira sp. strain RCC2705 small subunit ribosomal RNA gene, partial sequence