RCC2570

Synechococcus_sp

Distributed

Print

NB: Empty fields are hidden.

Please login or register to order strains

Login

Register

Exclusive Economic Zones (EEZs) are indicated on the map.

ABS compliance

Are users allowed to use this biological resource without applying for formal ABS authorization?
Yes - (B) Country of origin is party to the NP but no ABS authorization required (no national legislation)
ABS = Access & Benefit Sharing according to the Nagoya Protocol (NP) to the Convention for Biological Diversity (find out more here)
ABS Clearing House EMBRC step by step guide
IDENTITY

Synechococcus_sp

Domain: 
Bacteria
Division: 
Cyanophyta
Class: 
Cyanophyceae
Order: 
Synechococcales
Family: 
Synechococcaceae
Genus: 
Synechococcus
Clade: 
subcluster 5.1 - clade IVa
Strain name: 
MICROVIR 16CH_1-clonal
Strain name synonyms: 
MVIR-16-1
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
ORIGIN
Sampling ocean: 
Atlantic Ocean
Sampling regional sea: 
North Sea
Sampling country: 
UK
Sampling ecosystem: 
pelagic
Sampling cruise: 
MICROVIR
Sampling station: 
16
Sampling depth (m): 
10
Sampling date: 
Saturday, July 21, 2007
Isolation by: 
Foulon E. / Masquelier S.
CULTURE CONDITIONS
RCC medium: 
PCR-S11-Red Sea
RCC temperature: 
22.00
RCC transfer period weeks: 
4.00
RCC light: 
20
Phenotype pigment: 
Syn type 3d
Remark: 
This is a clonal version of RCC 1701
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Thursday, November 3, 2011
Mother strain: 
RCC1701
Sampling CTD: 
12
Sampling by: 
Foulon E. / Masquelier S.
Purification date: 
Saturday, October 1, 2011
Purification by: 
Christophe Six
Purification method: 
Serial platings

Sequences available for this RCC strain

GenBank Accession Gene name Genbank organism Genbank taxonomy Description
KF443070 petB Synechococcus sp. MVIR-16-1 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. MVIR-16-1 cytochrome b6 (petB) gene, partial cds

Associated references

Displaying 1 - 4 of 4
Grébert T, Doré H, Partensky F, Farrant GK, Boss ES, Picheral M, Guidi L, Pesant S, Scanlan DJ, Wincker P et al..  2018.  Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria. Proceedings of the National Academy of Sciences. in press:201717069. PDF icon Download pdf (3.72 MB)
Six C, Ratin M, Marie D, Corre E.  2021.  Marine Synechococcus picocyanobacteria: Light utilization across latitudes. Proceedings of the National Academy of Sciences. 118 PDF icon Download pdf (1.31 MB), PDF icon Download pdf (1.15 MB)
Doré H, Leconte J, Guyet U, Breton S, Farrant GK, Demory D, Ratin M, Hoebeke M, Corre E, Pitt FD et al..  2022.  Global Phylogeography of Marine Synechococcus in Coastal Areas Reveals Strong Community Shifts. mSystems. :e00656–22. PDF icon Download pdf (1.87 MB)
Barton S, Yang M, Chen H, Batchelor-McAuley C, Compton R, Bouman H, Rickaby R.  2023.  A novel fluoro-electrochemical technique for classifying diverse marine nanophytoplankton. PDF icon Download pdf (1.5 MB)