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RCC2533

Synechococcus_sp

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IDENTITY

Synechococcus_sp

Domain: 
Bacteria
Division: 
Cyanophyta
Class: 
Cyanophyceae
Order: 
Synechococcales
Family: 
Synechococcaceae
Genus: 
Synechococcus
Clade: 
subcluster 5.1 - clade CRD1a
Strain name: 
Biosope_199-Clonal
Strain name synonyms: 
BIOS-U3-1
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell assemblage: 
chains
Cell shape: 
cylindrical
Length: 
1.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Pacific Ocean
Sampling site: 
Chile upwelling
Sampling ecosystem: 
pelagic
Sampling cruise: 
Biosope
Sampling station: 
UPW1
Sampling depth (m): 
5
Sampling date: 
Monday, December 6, 2004
CULTURE CONDITIONS
RCC medium: 
RCC temperature: 
20.00
RCC transfer period weeks: 
3.00
Phenotype pigment: 
Syn type 3d
Remark: 
This is a clonal version of RCC1026. .<p>Genome will be sequenced by Genoscope in 2011

Sequences available for this RCC strain

GenBank Accession Gene name Genbank organism Genbank taxonomy Description
KF177886 CA4-A Synechococcus sp. BIOS-U3-1 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. BIOS-U3-1 CA4-A island genomic sequence
KF528768 cpeB Synechococcus sp. BIOS-U3-1 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. BIOS-U3-1 C-phycoerythrin class I subunit beta (cpeB) and C-phycoerythrin class I subunit alpha (cpeA) genes, complete cds
KF177887 cpeY Synechococcus sp. BIOS-U3-1 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. BIOS-U3-1 phycoerythrobilin:Cys-82 alpha-phycoerythrin lyase CpeY subunit (cpeY) gene, complete cds
KF177888 mpeY Synechococcus sp. BIOS-U3-1 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. BIOS-U3-1 putative phycoerythrobilin:phycoerythrin II lyase (mpeY) gene, complete cds
KF528806 rpcB Synechococcus sp. BIOS-U3-1 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. BIOS-U3-1 R-phycocyanin II beta subunit (rpcB) and R-phycocyanin II alpha subunit (rpcA) genes, complete cds
KU377986 petB Synechococcus sp. BIOS-U3-1 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. BIOS-U3-1 cytochrome b6 (petB) gene, complete cds