RCC2376

Synechococcus_sp

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IDENTITY

Synechococcus_sp

Domain: 
Bacteria
Division: 
Cyanophyta
Class: 
Cyanophyceae
Order: 
Synechococcales
Family: 
Synechococcaceae
Genus: 
Synechococcus
Clade: 
subcluster 5.1 - clade IIa
Strain name: 
RS9902 Clonal
Strain name synonyms: 
RS9902
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
coccoid
Length: 
1.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Indian Ocean
Sampling regional sea: 
Red Sea
Sampling site: 
Gulf of Aqaba
Sampling country: 
Israel
Sampling ecosystem: 
pelagic
Sampling depth (m): 
1
Sampling date: 
Monday, March 29, 1999
Isolation by: 
Fuller N.
CULTURE CONDITIONS
RCC medium: 
PCR-S11-Red Sea
RCC temperature: 
22.00
RCC transfer period weeks: 
4.00
RCC light: 
80
Phenotype pigment: 
Syn type 3c
Remark: 
Genome sequenced by Genoscope
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Tuesday, December 7, 2010
Mother strain: 
RCC541
Sampling by: 
Fuller N.
Deposit to RCC date: 
Friday, December 3, 2010
Deposit to rcc by: 
F. Humily
Purification date: 
Wednesday, December 1, 2010
Purification by: 
Florian Humily
Purification method: 
One colony on plate

Sequences available for this RCC strain

GenBank Accession Gene name Genbank organism Genbank taxonomy Description
KY854198 rmpF Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L32 (rmpF) gene, complete cds
KY854466 rplA Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L1 (rplA) gene, complete cds
KY854962 rplB Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L2 (rplB) gene, complete cds
MG014400 apcA Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 allophycocyanin alpha chain (apcA) gene, complete cds
KY854199 rmpG Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L33 (rmpG) gene, complete cds
KY854497 rplJ Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L10 (rplJ) gene, complete cds
KY854993 rplW Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L23 (rplW) gene, complete cds
MG014431 ApcB Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 allophycocyanin beta chain (apcB) gene, complete cds
KY854200 rpmH Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L34 (rpmH) gene, complete cds
KY854528 rplL Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L7/L12 (rplL) gene, complete cds
KY855024 rplD Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L4 (rplD) gene, complete cds
MG014462 apcD Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 allophycocyanin alpha-B chain (apcD) gene, complete cds
KY854201 rpmI Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L35 (rpmI) gene, complete cds
KY854559 rpsJ Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S10 (rpsJ) gene, complete cds
KY855055 rplC Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L3 (rplC) gene, complete cds
MG014493 apcF Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 allophycocyanin beta-18 chain (apcF) gene, complete cds
KY854202 rmpJ Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L36 (rmpJ) gene, complete cds
KY854590 rpsG Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S7 (rpsG) gene, complete cds
KY855086 rpsA1 Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S1 (rpsA1) gene, complete cds
MG014541 cpeY Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 phycoerythrobilin:Cys-82 alpha-phycoerythrin lyase CpeY subunit (cpeY) gene, complete cds
KY854203 rpsK Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S11 (rpsK) gene, complete cds
KY854621 rpsI Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S9 (rpsI) gene, complete cds
KY855117 rplS Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L19 (rplS) gene, complete cds
MG014566 mpeB Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 C-phycoerythrin class II beta chain (mpeB) and C-phycoerythrin class II alpha chain (mpeA) genes, complete cds
KF528778 cpeB Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. RS9902 C-phycoerythrin class I subunit beta (cpeB) and C-phycoerythrin class I subunit alpha (cpeA) genes, complete cds
KY854204 rpsL Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S12 (rpsL) gene, complete cds
KY854652 rplM Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L13 (rplM) gene, complete cds
KY855148 rpsA2 Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S1 (rpsA2) gene, complete cds
MG014590 mpeY Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 putative phycobilin:C-phycoerythrin II lyase (mpeY) gene, complete cds
KF528816 rpcB Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. RS9902 R-phycocyanin II beta subunit (rpcB) and R-phycocyanin II alpha subunit (rpcA) genes, complete cds
KY854205 rpsN Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S14 (rpsN) gene, complete cds
KY854683 rpsM Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S13 (rpsM) gene, complete cds
KY855179 rpsD Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S4 (rpsD) gene, complete cds
CP047949 Genome Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus; unclassified Synechococcus Synechococcus sp. RS9902 chromosome, complete genome
KT955728 mpeA Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. RS9902 C-phycoerythrin class II alpha chain (mpeA) gene, complete cds
KY854206 rpsO Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S15 (rpsO) gene, complete cds
KY854714 rpsE Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S5 (rpsE) gene, complete cds
KY855210 rpsP Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S16 (rpsP) gene, complete cds
KT955718 mpeB Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. RS9902 C-phycoerythrin class II beta chain (mpeB) gene, complete cds
KY854207 rpsQ Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S17 (rpsQ) gene, complete cds
KY854745 rplF Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L6 (rplF) gene, complete cds
KY855241 rpsR Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S18 (rpsR) gene, complete cds
KY854192 rplQ Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L17 (rplQ) gene, complete cds
KY854208 rpsS Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S19 (rpsS) gene, complete cds
KY854776 rpsH Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S8 (rpsH) gene, complete cds
KY855272 rpsB Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S2 (rpsB) gene, complete cds
KY854193 rplR Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L18 (rplR) gene, complete cds
KY854209 rpsU Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S21 (rpsU) gene, complete cds
KY854807 rplE Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L5 (rplE) gene, complete cds
KY855303 rpsT Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S20 (rpsT) gene, complete cds
KY854194 rplT Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L20 (rplT) gene, complete cds
KY854342 rplO Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L15 (rplO) gene, complete cds
KY854838 rplX Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L24 (rplX) gene, complete cds
KY855334 rpmA Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L27 (rpmA) gene, complete cds
KY854195 rplV Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L22 (rplV) gene, complete cds
KY854373 rpsF Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S6 (rpsF) gene, complete cds
KY854869 rplN Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L14 (rplN) gene, complete cds
KY855365 ycf65 Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 ribosomal protein Ycf65 (ycf65) gene, complete cds
KY854196 rpmB Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L28 (rpmB) gene, complete cds
KY854404 rplI Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L9 (rplI) gene, complete cds
KY854900 rplP Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L16 (rplP) gene, complete cds
KY860814 desC3 Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 delta-9 fatty acid desaturase (desC3) gene, complete cds
KY854197 rpmE Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L31 (rpmE) gene, complete cds
KY854435 rplK Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 50S ribosomal protein L11 (rplK) gene, complete cds
KY854931 rpsC Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 30S ribosomal protein S3 (rpsC) gene, complete cds
KY860860 desA2 Synechococcus sp. RS9902 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. RS9902 delta-12 fatty acid desaturase (desA2) gene, complete cds

Associated references

Displaying 1 - 2 of 2
Doré H, Farrant GK, Guyet U, Haguait J, Humily F, Ratin M, Pitt FD, Ostrowski M, Six C, Brillet-Guéguen L et al..  2020.  Evolutionary mechanisms of long-term genome diversification associated with niche partitioning in marine picocyanobacteria. Frontiers in Microbiology. 11:1–23. PDF icon Download pdf (13.44 MB)
Grébert T, Doré H, Partensky F, Farrant GK, Boss ES, Picheral M, Guidi L, Pesant S, Scanlan DJ, Wincker P et al..  2018.  Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria. Proceedings of the National Academy of Sciences. in press:201717069. PDF icon Download pdf (3.72 MB)