RCC1871

Chloropicon_roscoffensis

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IDENTITY

Chloropicon_roscoffensis

Domain: 
Eukaryota
Division: 
Chlorophyta
Class: 
Chloropicophyceae
Order: 
Chloropicales
Family: 
Chloropicaceae
Genus: 
Chloropicon
Genus synonym: 
Clade_VIIA4
Remark: 
Clade_VIIA4
Strain name: 
RA090205-09
Strain name synonyms: 
CCMP3407
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
coccoid
Length: 
2.00
ORIGIN
Sampling ocean: 
Atlantic Ocean
Sampling regional sea: 
English Channel
Sampling site: 
Britanny coast
Sampling country: 
France
Sampling ecosystem: 
coastal
Sampling station: 
Roscoff Astan
Sampling depth (m): 
0
Sampling date: 
Thursday, February 5, 2009
Isolation by: 
Marie D.
Isolation method: 
Flow cytometry sorting (500 cells)
CULTURE CONDITIONS
RCC medium: 
K
RCC temperature: 
13.00
RCC transfer period weeks: 
3.00
RCC light: 
45
Remark: 
Transciptomes done by Moore Foundation
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Thursday, October 15, 2009
Identification method: 
sequence
Sampling by: 
D. Marie
Isolation medium: 
K/10
Isolation light: 
100

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genome link Genbank organism Genbank taxonomy Description
MF077510 ITS rRNA nucleus prasinophyte sp. RCC1871 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; prasinophyte clade VII; unclassified prasinophyte clade VII Prasinophyte sp. RCC1871 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
MK085991 Genome plastid Chloropicon roscoffensis Eukaryota; Viridiplantae; Chlorophyta; Chloropicophyceae; Chloropicales; Chloropicaceae; Chloropicon Chloropicon roscoffensis culture RCC:1871 chloroplast, complete genome
MK086004 Genome mitochondrion Chloropicon roscoffensis Eukaryota; Viridiplantae; Chlorophyta; Chloropicophyceae; Chloropicales; Chloropicaceae; Chloropicon Chloropicon roscoffensis culture RCC:1871 mitochondrion, complete genome
Transcriptome Link MMETSP1456
LN735295 16S rRNA plastid Prasinophyceae sp. RCC1871 (clade 7X-A4) Eukaryota; Viridiplantae; Chlorophyta; prasinophytes Prasinophyceae sp. RCC1871 (clade 7X-A4) chloroplast partial 16S rRNA gene, strain RCC 1871
KF899840 18S rRNA nucleus Prasinophyceae sp. RCC1871 Eukaryota; Viridiplantae; Chlorophyta; Prasinophyceae Prasinophyceae sp. RCC1871 18S ribosomal RNA gene, partial sequence

Associated references

Displaying 1 - 4 of 4
Santos ALopes dos, Gourvil P, Tragin M, Noël M-H, Decelle J, Romac S, Vaulot D.  2017.  Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters. The ISME Journal. 11:512–528. PDF icon Download pdf (2.6 MB)
Turmel M, Santos ALopes dos, Otis C, Sergerie R, Lemieux C.  2019.  Tracing the evolution of the plastome and mitogenome in the chloropicophyceae uncovered convergent tRNA gene losses and a variant plastid genetic code. Genome Biology and Evolution. in press
Santos ALopes dos, Gourvil P, Rodriguez-Hernandez F, Garrido JLuis, Vaulot D.  2016.  Photosynthetic pigments of oceanic Chlorophyta belonging to prasinophytes clade VII. Journal of Phycology. 52:148–155. PDF icon Download pdf (979.53 KB)
Santos ALopes dos, Pollina T, Gourvil P, Corre E, Marie D, Garrido JLuis, Rodríguez F, Noël M-H, Vaulot D, Eikrem W.  2017.  Chloropicophyceae, a new class of picophytoplanktonic prasinophytes. Scientific Reports. 7:14019. PDF icon Download pdf (4.58 MB)