RCC1087

Synechococcus_sp

Distributed

NB: Empty fields are hidden.

Please login or register to order strains

ABS compliance

Are users allowed to use this biological resource without applying for formal ABS authorization?
Yes - (D) No information on country of origin, resource sampled pre-NP

ABS = Access & Benefit Sharing according to the Nagoya Protocol (NP) to the Convention for Biological Diversity (find out more here)
ABS Clearing House EMBRC step by step guide
IDENTITY

Synechococcus_sp

Domain: 
Bacteria
Division: 
Cyanophyta
Class: 
Cyanophyceae
Order: 
Synechococcales
Family: 
Synechococcaceae
Genus: 
Synechococcus
Clade: 
subcluster 5.1 - clade IIIa
Strain name: 
A15-24
Strain name synonyms: 
A15-24.2
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
coccoid
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Atlantic Ocean
Sampling regional sea: 
North Atlantic
Sampling country: 
International waters
Sampling ecosystem: 
pelagic
Sampling cruise: 
AMT 15
Sampling station: 
7
Sampling depth (m): 
35
Sampling date: 
Saturday, September 25, 2004
Isolation by: 
Zwirglmaier K.
Isolation method: 
enrichment, serial platings
CULTURE CONDITIONS
RCC medium: 
RCC temperature: 
22.00
RCC transfer period weeks: 
4.00
RCC light: 
20
Phenotype pigment: 
Syn type 3c
Remark: 
Genome sequenced by Genoscope
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Friday, July 27, 2007
Sampling CTD: 
18
Sampling bottle: 
15
Sampling by: 
Zwirglmaier K.
Deposit to RCC date: 
Friday, June 15, 2007
Deposit to rcc by: 
M. Ostrowski
Purification by: 
F.Pitt
Purification method: 
plating

Sequences available for this RCC strain

GenBank Accession Gene name Genbank organism Genbank taxonomy Description
KY853782 rpmB Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L28 (rpmB) gene, complete cds
KY854381 rplI Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L9 (rplI) gene, complete cds
KY854877 rplP Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L16 (rplP) gene, complete cds
KY860791 desC3 Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 delta-9 fatty acid desaturase (desC3) gene, complete cds
KY853783 rpmE Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L31 (rpmE) gene, complete cds
KY854412 rplK Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L11 (rplK) gene, complete cds
KY854908 rpsC Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S3 (rpsC) gene, complete cds
KY860822 desA3 Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 delta-12 fatty acid desaturase (desA3) gene, complete cds
KY853784 rmpF Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L32 (rmpF) gene, complete cds
KY854443 rplA Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L1 (rplA) gene, complete cds
KY854939 rplB Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L2 (rplB) gene, complete cds
KY860845 desA2 Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 delta-12 fatty acid desaturase (desA2) gene, complete cds
KY853785 rmpG Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L33 (rmpG) gene, complete cds
KY854474 rplJ Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L10 (rplJ) gene, complete cds
KY854970 rplW Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L23 (rplW) gene, complete cds
MG014423 apcA Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 allophycocyanin alpha chain (apcA) gene, complete cds
KY853786 rpmH Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L34 (rpmH) gene, complete cds
KY854505 rplL Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L7/L12 (rplL) gene, complete cds
KY855001 rplD Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L4 (rplD) gene, complete cds
MG014454 ApcB Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 allophycocyanin beta chain (apcB) gene, complete cds
KY853787 rpmI Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L35 (rpmI) gene, complete cds
KY854536 rpsJ Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S10 (rpsJ) gene, complete cds
KY855032 rplC Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L3 (rplC) gene, complete cds
MG014485 apcD Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 allophycocyanin alpha-B chain (apcD) gene, complete cds
KY853788 rmpJ Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L36 (rmpJ) gene, complete cds
KY854567 rpsG Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S7 (rpsG) gene, complete cds
KY855063 rpsA1 Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S1 (rpsA1) gene, complete cds
MG014516 apcF Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 allophycocyanin beta-18 chain (apcF) gene, complete cds
KY853789 rpsK Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S11 (rpsK) gene, complete cds
KY854598 rpsI Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S9 (rpsI) gene, complete cds
KY855094 rplS Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L19 (rplS) gene, complete cds
MG014524 cpcB Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 phycocyanin beta chain (cpcB) and phycocyanin alpha chain (cpcA) genes, complete cds
KY853790 rpsL Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S12 (rpsL) gene, complete cds
KY854629 rplM Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L13 (rplM) gene, complete cds
KY855125 rpsA2 Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S1 (rpsA2) gene, complete cds
MG014558 cpeY Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 phycoerythrobilin:Cys-82 alpha-phycoerythrin lyase CpeY subunit (cpeY) gene, complete cds
KY853791 rpsN Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S14 (rpsN) gene, complete cds
KY854660 rpsM Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S13 (rpsM) gene, complete cds
KY855156 rpsD Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S4 (rpsD) gene, complete cds
MG014585 mpeB Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 C-phycoerythrin class II beta chain (mpeB) and C-phycoerythrin class II alpha chain (mpeA) genes, complete cds
JF307481 petB A15-24
KY853792 rpsO Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S15 (rpsO) gene, complete cds
KY854691 rpsE Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S5 (rpsE) gene, complete cds
KY855187 rpsP Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S16 (rpsP) gene, complete cds
MG014604 mpeY Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 putative phycobilin:C-phycoerythrin II lyase (mpeY) gene, complete cds
JF307481 petB Synechococcus sp. A15-24.2 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24.2 cytochrome b6 gene, partial cds
KY853793 rpsQ Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S17 (rpsQ) gene, complete cds
KY854722 rplF Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L6 (rplF) gene, complete cds
KY855218 rpsR Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S18 (rpsR) gene, complete cds
MG018770 cpeB Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 C-phycoerythrin class I beta subunit (cpeB) and C-phycoerythrin class I alpha subunit (cpeA) genes, complete cds
KY853778 rplQ Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L17 (rplQ) gene, complete cds
KY853794 rpsS Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S19 (rpsS) gene, complete cds
KY854753 rpsH Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S8 (rpsH) gene, complete cds
KY855249 rpsB Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S2 (rpsB) gene, complete cds
CP047960 Genome Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus; unclassified Synechococcus Synechococcus sp. A15-24 chromosome, complete genome
KY853779 rplR Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L18 (rplR) gene, complete cds
KY853795 rpsU Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S21 (rpsU) gene, complete cds
KY854784 rplE Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L5 (rplE) gene, complete cds
KY855280 rpsT Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S20 (rpsT) gene, complete cds
KY853780 rplT Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L20 (rplT) gene, complete cds
KY854319 rplO Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L15 (rplO) gene, complete cds
KY854815 rplX Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L24 (rplX) gene, complete cds
KY855311 rpmA Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L27 (rpmA) gene, complete cds
KY853781 rplV Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L22 (rplV) gene, complete cds
KY854350 rpsF Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 30S ribosomal protein S6 (rpsF) gene, complete cds
KY854846 rplN Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 50S ribosomal protein L14 (rplN) gene, complete cds
KY855342 ycf65 Synechococcus sp. A15-24 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-24 ribosomal protein Ycf65 (ycf65) gene, complete cds