These strains are being characterized. Clade corresponds to 16S rRNA phylogeny.
Title | Genus | Strain name | Clade | Phenotype pigment | Sampling ocean | Sampling station | Sampling depth (m) | Distributed |
---|---|---|---|---|---|---|---|---|
RCC316 | Synechococcus | PROSOPE_37-2 | subcluster 5.1 - clade XVI | Syn type 3c | Mediterranean Sea | 3 | 110 | |
RCC317 | Synechococcus | PROSOPE_85-6 | subcluster 5.1 - clade XVI | Syn type 3d | Mediterranean Sea | 7 | 90 | |
RCC318 | Synechococcus | PROSOPE_41-3 | subcluster 5.1 - clade XVI | Syn type 3dA | Mediterranean Sea | 5 | 65 | |
RCC319 | Synechococcus | PROSOPE_157-21 | subcluster 5.1 - clade VIb | Syn type 3a | Mediterranean Sea | DYF | 15 | |
RCC320 | Synechococcus | PROSOPE_157-13 | subcluster 5.1 - clade Via | Syn type 3c? | Mediterranean Sea | DYF | 15 | |
RCC321 | Synechococcus | PROSOPE_32-1 | subcluster 5.1 - clade IIe | Syn type 3a | Mediterranean Sea | 3 | 5 | |
RCC322 | Synechococcus | PROSOPE_117-1 | subcluster 5.1 - clade VIb | Syn type 3a | Mediterranean Sea | 8 | 5 | |
RCC323 | Synechococcus | PROSOPE_97-4 | subcluster 5.1 - clade VIb | Syn type 2A | Mediterranean Sea | 7 | 5 | |
RCC324 | Synechococcus | PROSOPE_53-4 | subcluster 5.1 - clade Via | Syn type 3a | Mediterranean Sea | 5 | 5 | |
RCC325 | Synechococcus | PROSOPE_153-3 | subcluster 5.1 - clade Via | Syn type 3c | Mediterranean Sea | DYF | 25 | |
RCC326 | Synechococcus | PPROSOPE_53-19 | subcluster 5.1 - clade Via | Syn type 3b | Mediterranean Sea | 5 | 5 | |
RCC327 | Synechococcus | PROSOPE_25-2 | Syn type 3a | Mediterranean Sea | 3 | 25 | ||
RCC328 | Synechococcus | PROSOPE_135-5 | subcluster 5.1 - clade Ib | Syn type 3dA | Mediterranean Sea | 9 | 30 | |
RCC329 | Synechococcus | PROSOPE_77-2 | subcluster 5.1 - clade Via | Syn type 3a | Mediterranean Sea | MIO | 5 | |
RCC359 | Synechococcus | RA000711-27-14 | subcluster 5.1 - clade VIb | Syn type 3a | Atlantic Ocean | Roscoff Astan | 0 | |
RCC367 | Synechococcus | PROSOPE_25 | subcluster 5.1 - clade VIb | Syn type 3a | Mediterranean Sea | 3 | 25 | |
RCC374 | Synechococcus | PROSOPE_49-2 | subcluster 5.1 - clade IIe | Syn type 3a | Mediterranean Sea | 5 | 25 | |
RCC394 | Synechococcus | PROSOPE_1-9 | subcluster 5.1 - clade IIh | Syn type 3dB | Atlantic Ocean | UPW | 5 | |
RCC411 | Synechococcus | BL_17/4 | Syn type 2 | Mediterranean Sea | 0 | |||
RCC412 | Synechococcus | BL_10 | Syn type 2 | Mediterranean Sea | 0 | |||
RCC413 | Synechococcus | RA000609-11-2 | Syn type 1 | Atlantic Ocean | Roscoff Astan | 0 | ||
RCC442 | Synechococcus | PROSOPE_2-16 | subcluster 5.1 - clade IIh | Syn type 3d | Atlantic Ocean | UPW | 5 | |
RCC476 | Synechococcus | REDSEA_9821 | Syn type 3a | Indian Ocean | 0 | |||
RCC477 | Synechococcus | REDSEA_9823 | Syn type 3a | Indian Ocean | A | 120 | ||
RCC478 | Synechococcus | REDSEA_9827 | Syn type 3c | Indian Ocean | A | 20 | ||
RCC487 | Synechococcus | CA MAU_St8_1-2 | Syn type 1 | Pacific Ocean | 8 | 0 | ||
RCC508 | Synechococcus | BL_36_Syn | subcluster 5.1 - clade VIb | Syn type 3a | Mediterranean Sea | Blanès | 0 | |
RCC509 | Synechococcus | BL_38 | subcluster 5.2 ? | Syn type 1 | Mediterranean Sea | Blanès | 0 | |
RCC510 | Synechococcus | BL_38-7 | Syn type 1 | Mediterranean Sea | Blanès | 0 | ||
RCC511 | Synechococcus | BL_48 | subcluster 5.1 - clade Via | Syn type 3c | Mediterranean Sea | Blanès | 0 | |
RCC512 | Synechococcus | BL_59-8 | Syn type 1 | Mediterranean Sea | Blanès | 0 | ||
RCC513 | Synechococcus | BL_103 | Syn type 3b or 3d | Mediterranean Sea | CANYON | 1800 | ||
RCC514 | Synechococcus | BL_104 | Syn type 3b or 3d | Mediterranean Sea | CANYON | 1800 | ||
RCC515 | Synechococcus | BL_107 | subcluster 5.1 - clade IVa | Syn type 3dA | Mediterranean Sea | CANYON | 1800 | |
RCC516 | Synechococcus | BL_108 | Syn type 3b or 3d | Mediterranean Sea | CANYON | 1800 | ||
RCC517 | Synechococcus | BL_155 | Syn type 3a | Mediterranean Sea | Blanès | 0 | ||
RCC523 | Synechococcus | PROSOPE_110 | subcluster 5.1 - clade Via | Syn type 3a | Mediterranean Sea | 8 | 70 | |
RCC524 | Synechococcus | PROSOPE_107 | subcluster 5.1 - clade Ia | Syn type 3d | Mediterranean Sea | 8 | 90 | |
RCC525 | Synechococcus | PROSOPE_130 | subcluster 5.1 - clade VIc | Syn type 3c | Mediterranean Sea | 9 | 65 | |
RCC526 | Synechococcus | PROSOPE_17 | Syn type 3c | Mediterranean Sea | 3 | 80 | ||
RCC527 | Synechococcus | PROSOPE_101 | subcluster 5.1 - clade Via | Syn type 3d | Mediterranean Sea | 8 | 110 | |
RCC528 | Synechococcus | PROSOPE_70 | subcluster 5.1 - clade Via | Syn type 3c | Mediterranean Sea | MIO | 50 | |
RCC532 | Synechococcus | REDSEA_15-1 | Syn type 3c | Indian Ocean | A | 80 | ||
RCC539 | Synechococcus | WH8102 | subcluster 5.1 - clade IIIa | Syn type 3c | Atlantic Ocean | |||
RCC540 | Synechococcus | RS9901 | subcluster 5.1 - clade IX | Syn type 3b or 3d | Indian Ocean | 1 | ||
RCC541 | Synechococcus | RS9902 | subcluster 5.1 - clade IIa | Syn type 3c | Indian Ocean | 1 | ||
RCC542 | Synechococcus | RS9903 | subcluster 5.1 - clade IIa | Syn type 3c | Indian Ocean | 10 | ||
RCC543 | Synechococcus | RS9904 | subcluster 5.1 - clade IIa | Syn type 3c | Indian Ocean | 10 | ||
RCC544 | Synechococcus | RS9905 | subcluster 5.1 - clade IIIa | Syn type 3c | Indian Ocean | 10 | ||
RCC545 | Synechococcus | RS9906 | subcluster 5.1 - clade VIII | Syn type 1 | Indian Ocean | 10 |