RCC539

Synechococcus_sp

Distributed

Print

NB: Empty fields are hidden.

Please login or register to order strains

Login

Register

Exclusive Economic Zones (EEZs) are indicated on the map.

ABS compliance

Are users allowed to use this biological resource without applying for formal ABS authorization?
Yes - (D) No information on country of origin, resource sampled pre-NP
ABS = Access & Benefit Sharing according to the Nagoya Protocol (NP) to the Convention for Biological Diversity (find out more here)
ABS Clearing House EMBRC step by step guide
IDENTITY

Synechococcus_sp

Domain: 
Bacteria
Division: 
Cyanophyta
Class: 
Cyanophyceae
Order: 
Synechococcales
Family: 
Synechococcaceae
Genus: 
Synechococcus
Clade: 
subcluster 5.1 - clade IIIa
Strain name: 
WH8102
Strain name synonyms: 
CCMP2370
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
coccoid
Length: 
1.00
Cell motility: 
motile
ORIGIN
Sampling ocean: 
Atlantic Ocean
Sampling regional sea: 
Caribbean Sea
Sampling country: 
International waters
Sampling ecosystem: 
pelagic
Sampling cruise: 
Oceanus 92
Sampling date: 
Sunday, March 15, 1981
Isolation by: 
Waterbury J.
Isolation method: 
Cell enrichment liquid and solid
CULTURE CONDITIONS
RCC medium: 
PCR-S11-Red Sea
RCC temperature: 
20.00
RCC transfer period weeks: 
3.00
RCC light: 
100
Phenotype pigment: 
Syn type 3c
Remark: 
Genome sequenced by JGI
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Monday, June 3, 2002
Isolation medium: 
SNAX+F/40
Isolation light: 
20
Deposit to RCC date: 
Monday, April 12, 2010
Deposit to rcc by: 
D. Scanlan

Sequences available for this RCC strain

GenBank Accession Gene name Description
AF397712 ITS rRNA WH8102
BX548020 Genome Synechococcus sp. WH 8102

Associated references

Displaying 1 - 9 of 9
Mackey KRM, Post AF, McIlvin MR, Saito MA.  2017.  Physiological and proteomic characterization of light adaptations in marine Synechococcus. Environmental Microbiology. 19:2348–2365. PDF icon Download pdf (3.51 MB)
Doré H, Farrant GK, Guyet U, Haguait J, Humily F, Ratin M, Pitt FD, Ostrowski M, Six C, Brillet-Guéguen L et al..  2020.  Evolutionary mechanisms of long-term genome diversification associated with niche partitioning in marine picocyanobacteria. Frontiers in Microbiology. 11:1–23. PDF icon Download pdf (13.44 MB)
Grébert T, Doré H, Partensky F, Farrant GK, Boss ES, Picheral M, Guidi L, Pesant S, Scanlan DJ, Wincker P et al..  2018.  Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria. Proceedings of the National Academy of Sciences. in press:201717069. PDF icon Download pdf (3.72 MB)
Barton S, Yvon-Durocher G.  2019.  Quantifying the temperature dependence of growth rate in marine phytoplankton within and across species. Limnology and Oceanography.
Breton S, Jouhet J, Guyet U, Gros V, Pittera J, Demory D, Partensky F, Doré H, Ratin M, Maréchal É et al..  2019.  Unveiling membrane thermoregulation strategies in marine picocyanobacteria. New Phytologist. :nph.16239. PDF icon Download pdf (16.94 MB)
Tostevin R, Snow JT, Zhang Q, Tosca NJ, Rickaby REM.  2021.  The influence of elevated SiO2(aq) on intracellular silica uptake and microbial metabolism. Geobiology. n/a PDF icon Download pdf (1.9 MB)
Six C, Ratin M, Marie D, Corre E.  2021.  Marine Synechococcus picocyanobacteria: Light utilization across latitudes. Proceedings of the National Academy of Sciences. 118 PDF icon Download pdf (1.31 MB), PDF icon Download pdf (1.15 MB)
Ferrieux M, Dufour L, Doré H, Ratin M, Guéneuguès A, Chasselin L, Marie D, Rigaut-jalabert F, Le Gall F, Sciandra T et al..  2022.  Comparative Thermophysiology of Marine Synechococcus CRD1 Strains Isolated From Different Thermal Niches in Iron-Depleted Areas. Frontiers in Microbiology. 13 PDF icon Download pdf (2.17 MB)
Moreno-Cabezuelo JÁngel, Gómez-Baena G, Díez J, García-Fernández JManuel.  2023.  Integrated Proteomic and Metabolomic Analyses Show Differential Effects of Glucose Availability in Marine Synechococcus and Prochlorococcus. Microbiology Spectrum. :e03275–22. PDF icon Download pdf (3.63 MB)