Strains with sequenced transcriptomes

Strains for which the transcriptome has been sequenced. You can access the corresponding papers clicking on the RCC number and looking at the detailed form.

This shortlist returns 56 RCC strains

RCC# Class Genus Species Strain name
RCC15 Chloropicophyceae Chloropicon Chloropicon_primus CCMP1205
RCC80 Bacillariophyceae Nitzschia Nitzschia_sp ROS97004
RCC113 Mamiellophyceae Bathycoccus Bathycoccus_prasinos CCMP1898
RCC205 Bolidophyceae Triparma Triparma_pacifica OLI 31 SE3
RCC208 Bolidophyceae Triparma Triparma_eleuthera OLI 120 SD-A
RCC251 Pyramimonadophyceae Pycnococcus Pycnococcus_provasolii ROS9401
RCC365 Chlorarachniophyceae Partenskyella Partenskyella_glossopodia PROSOPE_99
RCC446 Dictyochophyceae Florenciella Florenciella_parvula RA000412-1-1
RCC451 Mamiellophyceae Micromonas Micromonas_commoda CCMP492
RCC701 Chloropicophyceae Chloropicon Chloropicon_laureae IndianOcean_8-1
RCC716 Mamiellophyceae Bathycoccus Bathycoccus_calidus IndianOcean_42-6
RCC733 Pyramimonadophyceae Pycnococcus Pycnococcus_provasolii IndianOcean_39-2
RCC856 Chloropicophyceae Chloropicon Chloropicon_laureae Biosope_42 A2
RCC918 Prymnesiophyceae Dicrateria Dicrateria_rotunda Biosope_179_FL2-1
RCC927 Prasinodermophyceae Prasinoderma Prasinoderma_singularis Biosope_243_FL1-4
RCC931 Pyramimonadophyceae Pycnococcus Pycnococcus_provasolii Biosope_206_FL1-1
RCC944 Trebouxiophyceae Picochlorum Picochlorum_sp Biosope_237_DVC4
RCC969 Pelagophyceae Pelagomonas Pelagomonas_calceolata Biosope_93 B
RCC998 Chloropicophyceae Chloropicon Chloropicon_mariensis Biosope_46 C3S
RCC1007 Dictyochophyceae Florenciella Florenciella_sp Biosope_40 A
RCC1024 Pelagophyceae Pelagomonadaceae_clade_C Pelagomonadaceae_clade_C_sp Biosope_25 B2
RCC1054 Trebouxiophyceae Stichococcus Stichococcus_sp Biosope_148 A1C1-1
RCC1107 Mamiellophyceae Ostreococcus Ostreococcus_mediterraneus OBag1
RCC1130 Prymnesiophyceae Calcidiscus Calcidiscus_leptoporus AC370
RCC1303 Prymnesiophyceae Gephyrocapsa Gephyrocapsa_oceanica AC300
RCC1383 Prymnesiophyceae Phaeocystis Phaeocystis_cordata PhaeoNap1
RCC1455 Prymnesiophyceae Scyphosphaera Scyphosphaera_apsteinii AC505
RCC1486 Pavlovophyceae Rebecca Rebecca_salina Ccult
RCC1523 Pavlovophyceae Exanthemachrysis Exanthemachrysis_gayraliae AC15
RCC1524 Pavlovophyceae Pavlova Pavlova_gyrans AC98
RCC1537 Pavlovophyceae Diacronema Diacronema_lutheri AC44
RCC1587 Dictyochophyceae Florenciella Florenciella_sp MICROVIR 4CH_0
RCC1614 Mamiellophyceae Micromonas Micromonas_pusilla MICROVIR 13CH_0
RCC1621 Mamiellophyceae Ostreococcus Ostreococcus_mediterraneus 109_3_1
RCC1657 Bolidophyceae Triparma Triparma_sp MICROVIR 3K_0
RCC1693 Dictyochophyceae Florenciella Florenciella_sp MICROVIR 9CH_0
RCC1871 Chloropicophyceae Chloropicon Chloropicon_roscoffensis RA090205-09
RCC1993 Mediophyceae Chaetoceros Chaetoceros_neogracilis MALINA FT99.3 PG5
RCC2288 Mamiellophyceae Mantoniella Mantoniella_beaufortii MALINA E47.P2
RCC2306 Mamiellophyceae Micromonas Micromonas_polaris MALINA S522
RCC2335 Chloropicophyceae Chloropicon Chloropicon_roscoffensis JST MH317
RCC2336 Pyramimonadophyceae Pycnococcus Pycnococcus_provasolii JST MH318
RCC2339 Chloropicophyceae Chloroparvula Chloroparvula_japonica JST MH340
RCC2347 Bolidophyceae Triparma Triparma_eleuthera BOUM117-22
RCC2572 Mamiellophyceae Ostreococcus Ostreococcus_mediterraneus Obag2
RCC2573 Mamiellophyceae Ostreococcus Ostreococcus_mediterraneus 133 3 1
RCC2589 Mamiellophyceae Bathycoccus Bathycoccus_prasinos P_4-10_2
RCC2590 Mamiellophyceae Ostreococcus Ostreococcus_mediterraneus P_4-03_1
RCC2591 Mamiellophyceae Ostreococcus Ostreococcus_mediterraneus P_4-04_1
RCC2593 Mamiellophyceae Ostreococcus Ostreococcus_mediterraneus P_4-21_1
RCC2595 Mamiellophyceae Ostreococcus Ostreococcus_mediterraneus Pd_2-07_1
RCC2596 Mamiellophyceae Ostreococcus Ostreococcus_mediterraneus P_4-24_2
RCC3368 Chloropicophyceae Chloropicon Chloropicon_sp CCMP2111
RCC3375 Chloropicophyceae Chloropicon Chloropicon_laureae CCMP2175
RCC3387 Dinophyceae Brandtodinium Brandtodinium_nutricula VFR1-1
RCC4223 Trebouxiophyceae Picochlorum Picochlorum_costavermella BCC143000