RCC328

Synechococcus_sp

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Yes - (D) No information on country of origin, resource sampled pre-NP

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IDENTITY

Synechococcus_sp

Domain: 
Bacteria
Division: 
Cyanophyta
Class: 
Cyanophyceae
Order: 
Synechococcales
Family: 
Synechococcaceae
Genus: 
Synechococcus
Clade: 
subcluster 5.1 - clade Ib
Strain name: 
PROSOPE_135-5
Strain name synonyms: 
PROS-9-1
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
coccoid
Length: 
1.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Mediterranean Sea
Sampling ecosystem: 
pelagic
Sampling cruise: 
PROSOPE
Sampling station: 
9
Sampling depth (m): 
30
Sampling date: 
Tuesday, September 28, 1999
Isolation by: 
Partensky F.
Isolation method: 
Filtration < 0.6 µm
CULTURE CONDITIONS
RCC medium: 
RCC temperature: 
22.00
RCC transfer period weeks: 
3.00
Phenotype pigment: 
Syn type 3dA
Remark: 
Genome sequenced by Genoscope
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Thursday, July 13, 2000
Sampling CTD: 
70
Sampling bottle: 
17
Sampling by: 
Partensky F.
Isolation preculture number: 
135
Isolation medium: 
Pro2/10
Isolation light: 
100
Purification date: 
Thursday, January 27, 2000
Purification by: 
F.Le Gall
Purification method: 
Filtration+Dilution

Sequences available for this RCC strain

GenBank Accession Gene name Genbank organism Genbank taxonomy Description
KY854138 rplQ Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L17 (rplQ) gene, complete cds
KY854154 rpsS Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S19 (rpsS) gene, complete cds
KY854773 rpsH Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S8 (rpsH) gene, complete cds
KY855269 rpsB Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S2 (rpsB) gene, complete cds
MG014592 mpeY Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 putative phycobilin:C-phycoerythrin II lyase (mpeY) gene, complete cds
KY854139 rplR Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L18 (rplR) gene, complete cds
KY854155 rpsU Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S21 (rpsU) gene, complete cds
KY854804 rplE Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L5 (rplE) gene, complete cds
KY855300 rpsT Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S20 (rpsT) gene, complete cds
MG014606 mpeZ Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 phycoerythrobilin:Cys-83 alpha-phycoerythrin II lyase-isomerase (mpeZ) gene, complete cds
KY854140 rplT Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L20 (rplT) gene, complete cds
KY854339 rplO Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L15 (rplO) gene, complete cds
KY854835 rplX Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L24 (rplX) gene, complete cds
KY855331 rpmA Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L27 (rpmA) gene, complete cds
MG018775 cpeB Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 C-phycoerythrin class I beta subunit (cpeB) and C-phycoerythrin class I alpha subunit (cpeA) genes, complete cds
KY854141 rplV Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L22 (rplV) gene, complete cds
KY854370 rpsF Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S6 (rpsF) gene, complete cds
KY854866 rplN Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L14 (rplN) gene, complete cds
KY855362 ycf65 Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 ribosomal protein Ycf65 (ycf65) gene, complete cds
CP047961 Genome Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus; unclassified Synechococcus Synechococcus sp. PROS-9-1 chromosome, complete genome
KY854142 rpmB Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L28 (rpmB) gene, complete cds
KY854401 rplI Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L9 (rplI) gene, complete cds
KY854897 rplP Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L16 (rplP) gene, complete cds
KY860811 desC3 Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 delta-9 fatty acid desaturase (desC3) gene, complete cds
KY854143 rpmE Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L31 (rpmE) gene, complete cds
KY854432 rplK Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L11 (rplK) gene, complete cds
KY854928 rpsC Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S3 (rpsC) gene, complete cds
KY860839 desA3 Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 delta-12 fatty acid desaturase (desA3) gene, complete cds
KY854144 rmpF Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L32 (rmpF) gene, complete cds
KY854463 rplA Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L1 (rplA) gene, complete cds
KY854959 rplB Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L2 (rplB) gene, complete cds
KY860876 desC4 Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 delta-9 fatty acid desaturase (desC4) gene, complete cds
KY854145 rmpG Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L33 (rmpG) gene, complete cds
KY854494 rplJ Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L10 (rplJ) gene, complete cds
KY854990 rplW Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L23 (rplW) gene, complete cds
MG014403 apcA Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 allophycocyanin alpha chain (apcA) gene, complete cds
KY854146 rpmH Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L34 (rpmH) gene, complete cds
KY854525 rplL Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L7/L12 (rplL) gene, complete cds
KY855021 rplD Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L4 (rplD) gene, complete cds
MG014434 ApcB Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 allophycocyanin beta chain (apcB) gene, complete cds
KY854147 rpmI Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L35 (rpmI) gene, complete cds
KY854556 rpsJ Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S10 (rpsJ) gene, complete cds
KY855052 rplC Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L3 (rplC) gene, complete cds
MG014465 apcD Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 allophycocyanin alpha-B chain (apcD) gene, complete cds
KY854148 rmpJ Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L36 (rmpJ) gene, complete cds
KY854587 rpsG Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S7 (rpsG) gene, complete cds
KY855083 rpsA1 Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S1 (rpsA1) gene, complete cds
MG014496 apcF Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 allophycocyanin beta-18 chain (apcF) gene, complete cds
KY854149 rpsK Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S11 (rpsK) gene, complete cds
KY854618 rpsI Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S9 (rpsI) gene, complete cds
KY855114 rplS Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L19 (rplS) gene, complete cds
MG014519 cpcB Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 phycocyanin beta chain (cpcB) and phycocyanin alpha chain (cpcA) genes, complete cds
KY854150 rpsL Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S12 (rpsL) gene, complete cds
KY854649 rplM Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L13 (rplM) gene, complete cds
KY855145 rpsA2 Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S1 (rpsA2) gene, complete cds
MG014529 cpeF Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 putative phycoerythrin:phycoerythrobilin lyase (cpeF) gene, complete cds
KY854151 rpsN Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S14 (rpsN) gene, complete cds
KY854680 rpsM Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S13 (rpsM) gene, complete cds
KY855176 rpsD Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S4 (rpsD) gene, complete cds
MG014543 cpeY Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 phycoerythrobilin:Cys-82 alpha-phycoerythrin lyase CpeY subunit (cpeY) gene, complete cds
KY854152 rpsO Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S15 (rpsO) gene, complete cds
KY854711 rpsE Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S5 (rpsE) gene, complete cds
KY855207 rpsP Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S16 (rpsP) gene, complete cds
MG014559 fciA Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 putative AraC-type helix-turn-helix DNA-binding domain-containing transcriptional regulator (fciA) and putative AraC-type helix-turn-helix DNA-binding domain-containing transcriptional regulator (fciB) genes, complete cds
JF307534 petB PROSOPE_135-5
KY854153 rpsQ Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S17 (rpsQ) gene, complete cds
KY854742 rplF Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 50S ribosomal protein L6 (rplF) gene, complete cds
KY855238 rpsR Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 30S ribosomal protein S18 (rpsR) gene, complete cds
MG014569 mpeB Synechococcus sp. PROS-9-1 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. PROS-9-1 C-phycoerythrin class II beta chain (mpeB) and C-phycoerythrin class II alpha chain (mpeA) genes, complete cds