RCC299

Micromonas_commoda

Not distributed

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  • E.Foulon - SEM
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Are users allowed to use this biological resource without applying for formal ABS authorization?
No - (E) Country of origin is party to the NP and ABS authorization may be required: contact the relevant ABS NFP
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IDENTITY

Micromonas_commoda

Domain: 
Eukaryota
Division: 
Chlorophyta
Class: 
Mamiellophyceae
Order: 
Mamiellales
Family: 
Mamiellaceae
Genus: 
Micromonas
Clade: 
clade A
Strain name: 
NOUM17
Strain name synonyms: 
NOUM97017, NIES-2672
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
Substitute strain (e.g. for cryopreserved or lost strains): 
RCC827
MORPHOLOGY
Length: 
2.00
Cell motility: 
flagellated
ORIGIN
Sampling ocean: 
Pacific Ocean
Sampling regional sea: 
Equatorial Pacific
Sampling country: 
France
Sampling ecosystem: 
pelagic
Sampling cruise: 
Ebene
Sampling depth (m): 
0
Sampling date: 
Tuesday, February 10, 1998
Isolation by: 
Boulben S.
Isolation method: 
Cell Enrichment
CULTURE CONDITIONS
RCC medium: 
K
RCC temperature: 
20.00
RCC transfer period weeks: 
2.00
RCC light: 
100
Remark: 
The clonal version of this strain is RCC 827. We recommend that you RCC 827 rather than RCC 299.
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Wednesday, April 26, 2000
Daughter strains: 
RCC827
Identification by: 
L. Guillou
Isolation growth temperature: 
26.00
Isolation medium: 
milieu PC
Isolation light: 
100
Deposit to RCC date: 
Tuesday, August 5, 1997
Deposit to rcc by: 
J. Blanchot

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genome link Genbank organism Genbank taxonomy Description
CP001329 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 9, complete sequence
CP001576 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 10, complete sequence
CP001330 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 11, complete sequence
CP001577 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 12, complete sequence
CP001331 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 13, complete sequence
CP001332 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 14, complete sequence
PRJNA9769 Genome nucleus Link Micromonas sp. RCC299
CP001333 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 15, complete sequence
FJ858267 Genome plastid Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chloroplast, complete genome
CP001334 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 16, complete sequence
CP001574 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 1, complete sequence
CP001335 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 17, complete sequence
CP001323 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 2, complete sequence
FJ859351 Genome mitochondrion Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 mitochondrion, complete genome
CP001324 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 3, complete sequence
XM_002503695 RCC1 nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas commoda regulator of chromosome condensation RCC1 (RCC1), partial mRNA
CP001325 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 4, complete sequence
XM_002507707 RCC1 nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas commoda regulator of chromosome condensation, RCC1 partial mRNA
CP001326 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 5, complete sequence
CP001327 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 6, complete sequence
CP001328 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 7, complete sequence
CP001575 Genome nucleus Micromonas commoda Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC299 chromosome 8, complete sequence

Associated references

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McDonald SM, Plant JN, Worden AZ.  2010.  The mixed lineage nature of nitrogen transport and assimilation in marine eukaryotic phytoplankton: a case study of Micromonas. Molecular Biology and Evolution. 27:2268–2283. PDF icon Download pdf (1.23 MB)
Leconte, Benites, Vannier, Wincker, Piganeau, Jaillon.  2020.  Genome resolved biogeography of mamiellales. Genes. 11:66. PDF icon Download pdf (1.03 MB)
Cuvelier ML, Guo J, Ortiz AC, van Baren MJ, Tariq MAkram, Partensky F, Worden AZ.  2017.  Responses of the picoprasinophyte Micromonas commoda to light and ultraviolet stress. PLOS ONE. 12:e0172135. PDF icon Download pdf (3.4 MB)
Fiore CL, Alexander H, Soule MCKido, Kujawinski EB.  2018.  A phosphate starvation response gene (psr1-like) is present and expressed in Micromonas pusilla and other marine algae. bioRxiv. PDF icon Download pdf (666.41 KB)
Worden AZ, Lee J.-H, Mock T, Rouzé P, Simmons MP, Aerts AL, Allen AE, Cuvelier ML, Derelle E, Everett MV et al..  2009.  Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Science. 324:268–272.
Simon N, Foulon E, Grulois D, Six C, Desdevises Y, Latimier M, Le Gall F, Tragin M, Houdan A, Derelle E et al..  2017.  Revision of the genus micromonas manton et parke (chlorophyta, mamiellophyceae), of the type species m. pusilla (butcher) manton & parke and of the species m. commoda van baren, bachy and worden and description of two new species based on the genetic. Protist. 168:612–635. PDF icon Download pdf (7.29 MB)
Blanc-Mathieu R, Krasovec M, Hebrard M, Yau S, Desgranges E, Martin J, Schackwitz W, Kuo A, Salin G, Donnadieu C et al..  2017.  Population genomics of picophytoplankton unveils novel chromosome hypervariability. Science Advances. 3:e1700239.
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Weynberg KD, Allen MJ, Wilson WH.  2017.  Marine prasinoviruses and their tiny plankton hosts : A review. Viruses. :1–20. PDF icon Download pdf (4.59 MB)
Turmel M, Otis C, Lemieux C.  2010.  A deviant genetic code in the reduced mitochondrial genome of the picoplanktonic green alga pycnococcus provasolii. Journal of Molecular Evolution. 70:203–214. PDF icon Download pdf (3.28 MB)
Demory D, Baudoux A-claire, Monier A, Simon N, Six C, Ge P, Rigaut-jalabert F, Marie D, Sciandra A, Bernard O et al..  2019.  Picoeukaryotes of the Micromonas genus: sentinels of a warming ocean. The ISME Journal. 13:132–146. PDF icon Download pdf (2.51 MB)
Yau S, Hemon C, Derelle E, Moreau H, Piganeau G, Grimsley N.  2016.  A viral immunity chromosome in the marine picoeukaryote, ostreococcus tauri. PLOS Pathogens. 12:e1005965. PDF icon Download pdf (2.55 MB)
Marie D, Le Gall F, Edern R, Gourvil P, Vaulot D.  2017.  Improvement of phytoplankton culture isolation using single cell sorting by flow cytometry. Journal of Phycology. 53:271–282. PDF icon Download pdf (267.95 KB)
Wheeler G, Ishikawa T, Pornsaksit V, Smirnoff N.  2015.  Evolution of alternative biosynthetic pathways for vitamin C following plastid acquisition in photosynthetic eukaryotes. eLife. 4:1–25. PDF icon Download pdf (2.17 MB)
Leliaert F, Tronholm A, Lemieux C, Turmel M, DePriest MS, Bhattacharya D, Karol KG, Fredericq S, Zechman FW, Lopez-Bautista JM.  2016.  Chloroplast phylogenomic analyses reveal the deepest-branching lineage of the Chlorophyta, Palmophyllophyceae class. nov.. Scientific Reports. 6:25367. PDF icon Download pdf (2.32 MB)
Benites LFelipe, Bucchini F, Sanchez-Brosseau S, Grimsley N, Vandepoele K, Piganeau G.  2021.  Evolutionary Genomics of Sex-Related Chromosomes at the Base of the Green Lineage. Genome Biology and Evolution. 13:evab216. PDF icon Download pdf (2 MB)