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Durak GM, Taylor AR, Probert I, de Vargas C, Audic S, Schroeder DC, Brownlee C, Wheeler GL.  2016.  A role for diatom-like silicon transporters in calcifying coccolithophores. Nature Communications. 7:10543.PDF icon Durak et al_2016_A role for diatom-like silicon transporters in calcifying coccolithophores.pdf (1.95 MB)
Dupuy C, Vaquer A, LamHoai T, Rougier C, Mazouni N, Lautier J, Collos Y, LeGall S.  2000.  Feeding rate of the oyster Crassostrea gigas in a natural planktonic community of the Mediterranean Thau Lagoon. Marine Ecology - Progress Series. 205:171–184.PDF icon Dupuy et al_2000_Feeding rate of the oyster Crassostrea gigas in a natural planktonic community.pdf (228.35 KB)
Duanmu D, Bachy C, Sudek S, Wong C-H, Jimenez V, Rockwell NC, Martin SS, Ngan CYee, Reistetter EN, van Baren MJ et al..  2014.  Marine algae and land plants share conserved phytochrome signaling systems. Proceedings of the National Academy of Sciences of the United States of America. 111:15827–15832.
Drescher B, Dillaman RM, Taylor AR.  2012.  Coccolithogenesis in scyphosphaera apsteinii (prymnesiophyceae). Journal of Phycology. 48:1343–1361.
Dorrell RG, Gile G, McCallum G, Méheust R, Bapteste EP, Klinger CM, Brillet-Guéguen L, Freeman KD, Richter DJ, Bowler C.  2017.  Chimeric origins of ochrophytes and haptophytes revealed through an ancient plastid proteome. eLife. 6:1–45.
Doré H, Farrant GK, Guyet U, Haguait J, Humily F, Ratin M, Pitt FD, Ostrowski M, Six C, Brillet-Guéguen L et al..  2020.  Evolutionary mechanisms of long-term genome diversification associated with niche partitioning in marine picocyanobacteria. Frontiers in Microbiology. 11:1–23.PDF icon Dore et al_2020_Evolutionary mechanisms of long-term genome diversification associated with.pdf (13.44 MB)
Domínguez-Martín MAgustina, Gómez-Baena G, Díez J, López-Grueso MJosé, Beynon RJ, García-Fernández JManuel.  2017.  Quantitative proteomics shows extensive remodeling induced by nitrogen limitation in prochlorococcus marinus SS120. mSystems. 2:e00008–17.PDF icon Dominguez-Martin et al_2017_Quantitative proteomics shows extensive remodeling induced by nitrogen.pdf (3.74 MB)
Dimier C, Corato F, Saviello G, Brunet C.  2007.  Photophysiological properties of the marine picoeukaryote Picochlorum RCC 237 (Trebouxiophyceae, Chlorophyta). Journal of Phycology. 43:275–283.
Dia A, Guillou L, Mauger S, Bigeard E, Marie D, Valero M, Destombe C.  2014.  Spatiotemporal changes in the genetic diversity of harmful algal blooms caused by the toxic dinoflagellate Alexandrium minutum. Molecular Ecology. 23:549–560.PDF icon Dia et al_2014_Spatiotemporal changes in the genetic diversity of harmful algal blooms caused.pdf (764.4 KB)
Descles J, Vartanian M, A Harrak E, Quinet M, Bremond N, Sapriel G, Bibette J, Lopez PJ.  2008.  New tools for labeling silica in living diatoms. New Phytologist. 177:822–829.PDF icon Descles et al_2008_New tools for labeling silica in living diatoms.pdf (277.23 KB)
Derilus D, Rahman MZ, Pinero F, Massey SE.  2020.  Synergism between the Black Queen effect and the proteomic constraint on genome size reduction in the photosynthetic picoeukaryotes. Scientific Reports. 10:8918.PDF icon Derilus et al_2020_Synergism between the Black Queen effect and the proteomic constraint on genome.pdf (2.27 MB)
Derelle E, Yau S, Moreau H, Grimsley NH.  2017.  Prasinovirus attack of ostreococcus is furtive by day but savage by night. Journal of Virology. 92:JVI.01703–17.PDF icon Derelle et al_2017_Prasinovirus attack of ostreococcus is furtive by day but savage by night.pdf (3.92 MB)
Derelle E, Ferraz C, Lagoda P, Eychenie S, Cooke R, Regad F, Sabau X, Courties C, Delseny M, Demaille J et al..  2002.  DNA libraries for sequencing the genome of Ostreococcus tauri (Chlorophyta, Prasinophyceae): The smallest free-living eukaryotic cell. Journal of Phycology. 38:1150–1156.
Derelle E, Ferraz C, Rombauts S, Rouze P, Worden AZ, Robbens S, Partensky F, Degroeve S, Echeynie S, Cooke R et al..  2006.  Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Proceedings of the National Academy of Sciences of the United States of America. 103:11647–11652.PDF icon Derelle et al_2006_Genome analysis of the smallest free-living eukaryote Ostreococcus tauri.pdf (1.01 MB)
Derelle E, Ferraz C, Escande M-L, Eychenié S, Cooke R, Piganeau G, Desdevises Y, Bellec L, Moreau H, Grimsley N.  2008.  Life-cycle and genome of OtV5, a large DNA virus of the pelagic marine unicellular green alga ¡i¿Ostreococcus tauri¡/i¿. PLoS ONE. 3:e2250.PDF icon Derelle et al_2008_Life-cycle and genome of OtV5, a large DNA virus of the pelagic marine.pdf (536.39 KB)
Demory D, Arsenieff L, Simon N, Six C, Rigaut-jalabert F, Marie D, Ge P, Bigeard E, Jacquet S, Sciandra A et al..  2017.  Temperature is a key factor in Micromonas–virus interactions. The ISME Journal. 11:601–612.PDF icon Demory et al_2017_Temperature is a key factor in Micromonas–virus interactions.pdf (694.6 KB)
Demory D, Weitz JS, Baudoux A-claire, Touzeau S, Simon N, Rabouille S, Sciandra A, Bernard O.  2020.  A thermal trade-off between viral production and degradation drives phytoplankton-virus population dynamics. bioRxiv. :2020.08.18.256156.PDF icon Demory et al_2020_A thermal trade-off between viral production and degradation drives.pdf (5.32 MB)
Demory D, Baudoux A-claire, Monier A, Simon N, Six C, Ge P, Rigaut-jalabert F, Marie D, Sciandra A, Bernard O et al..  2019.  Picoeukaryotes of the Micromonas genus: sentinels of a warming ocean. The ISME Journal. 13:132–146.PDF icon Demory et al_2019_Picoeukaryotes of the Micromonas genus.pdf (2.51 MB)
Demir-Hilton E, Sudek S, Cuvelier ML, Gentemann CL, Zehr JP, Worden AZ.  2011.  Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus. The ISME journal. 5:1095–1107.PDF icon Demir-Hilton et al_2011_Global distribution patterns of distinct clades of the photosynthetic.pdf (5.04 MB)
Delmont TO, A. Eren M.  2018.  Linking pangenomes and metagenomes: the Prochlorococcus metapangenome. PeerJ. 6:e4320.PDF icon Delmont_Eren_2018_Linking pangenomes and metagenomes.pdf (10.22 MB)
del Campo J, Sieracki ME, Molestina R, Keeling P, Massana R, Ruiz-Trillo I.  2014.  The others: our biased perspective of eukaryotic genomes. Trends in Ecology & Evolution. 29:252–259.PDF icon del Campo et al_2014_The others.pdf (906.55 KB)
Degraeve-Guilbault C, Bréhélin C, Haslam R, Sayanova O, Marie-Luce G, Jouhet J, Corellou F.  2017.  Glycerolipid characterization and nutrient deprivation-associated changes in the green picoalga ostreococcus tauri. Plant Physiology. 173:2060–2080.PDF icon Degraeve-Guilbault et al_2017_Glycerolipid characterization and nutrient deprivation-associated changes in.pdf (2.8 MB)
Decelle J, Romac S, Stern RF, Bendif EMahdi, Zingone A, Audic S, Guiry MD, Guillou L, Tessier D, Le Gall F et al..  2015.  PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy. Molecular Ecology Resources. 15:1435–1445.PDF icon Decelle et al_2015_PhytoREF.pdf (739.73 KB)
Decelle J, Probert I, Bittner L, Desdevises Y, Colin S, de Vargas C, Gali M, Simo R, Not F.  2012.  An original mode of symbiosis in open ocean plankton. Proceedings of the National Academy of Sciences of the United States of America. 109:18000–18005.
Decelle J, Stryhanyuk H, Gallet B, Veronesi G, Schmidt M, Balzano S, Marro S, Uwizeye C, Jouneau P-H, Lupette J et al..  2019.  Algal remodeling in a ubiquitous planktonic photosymbiosis. Current Biology. 29:968–978.e4.PDF icon Decelle et al_2019_Algal remodeling in a ubiquitous planktonic photosymbiosis.pdf (5.3 MB)