RCC references

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Zheng Q, Liu Y, Jeanthon C, Zhang R, Lin W, Yao J, Jiao N.  2016.  The geographic impact on genomic divergence as revealed by comparison of nine Citromicrobial genomes. Applied and Environmental Microbiology. 82:AEM.02495–16.PDF icon Zheng et al_2016_The geographic impact on genomic divergence as revealed by comparison of nine.pdf (2.29 MB)
Laloui W, Palinska KA, Rippka R, Partensky F, de Marsac NT, Herdman M, Iteman I.  2002.  Genotyping of axenic and non-axenic isolates of the genus Prochlorococcus and the OMF-'Synechococcus' clade by size, sequence analysis or RFLP of the Internal Transcribed Spacer of the ribosomal operon. Microbiology. 148:453–465.PDF icon Laloui et al_2002_Genotyping of axenic and non-axenic isolates of the genus Prochlorococcus and.pdf (614.58 KB)
Astorga-Eló M, Ramírez-Flandes S, DeLong EF, Ulloa O.  2015.  Genomic potential for nitrogen assimilation in uncultivated members of Prochlorococcus from an anoxic marine zone. The ISME Journal. 9:1264–1267.PDF icon Astorga-Elo et al_2015_Genomic potential for nitrogen assimilation in uncultivated members of.pdf (2.39 MB)
Stuart RK, Brahamsha B, Busby K, Palenik B.  2013.  Genomic island genes in a coastal marine Synechococcus strain confer enhanced tolerance to copper and oxidative stress. The ISME Journal. 7:1139–1149.PDF icon Stuart et al_2013_Genomic island genes in a coastal marine Synechococcus strain confer enhanced.pdf (544.84 KB)
Ruvindy R, Barua A, Bolch CJS, Sarowar C, Savela H, Murray SA.  2023.  Genomic copy number variability at the genus, species and population levels impacts in situ ecological analyses of dinoflagellates and harmful algal blooms. ISME Communications. 3:1–11.PDF icon Ruvindy et al_2023_Genomic copy number variability at the genus, species and population levels.pdf (2.58 MB)
Redondo ERey, Xu Y, Yung CCheuk Man.  2024.  Genomic characterisation and ecological distribution of Mantoniella tinhauana: a novel Mamiellophycean green alga from the Western Pacific. Frontiers in Microbiology. 15:1358574.PDF icon Rey Redondo et al_2024_Genomic characterisation and ecological distribution of Mantoniella tinhauana.pdf (4.43 MB)
Penot M, Dacks JB, Read B, Dorrell RG.  2022.  Genomic and meta-genomic insights into the functions, diversity and global distribution of haptophyte algae. Applied Phycology. :1–20.PDF icon Penot et al_2022_Genomic and meta-genomic insights into the functions, diversity and global.pdf (8.69 MB)
Cho A, Lax G, Livingston SJ, Masukagami Y, Naumova M, Millar O, Husnik F, Keeling PJ.  2024.  Genomic analyses of Symbiomonas scintillans show no evidence for endosymbiotic bacteria but does reveal the presence of giant viruses. PLOS Genetics. 20:e1011218.PDF icon Cho et al_2024_Genomic analyses of Symbiomonas scintillans show no evidence for endosymbiotic.pdf (6.58 MB)
Guérin N, Ciccarella M, Flamant E, Frémont P, Mangenot S, Istace B, Noel B, Belser C, Bertrand L, Labadie K et al..  2022.  Genomic adaptation of the picoeukaryote Pelagomonas calceolata to iron-poor oceans revealed by a chromosome-scale genome sequence. Communications Biology. 5:1–14.PDF icon Guerin et al_2022_Genomic adaptation of the picoeukaryote Pelagomonas calceolata to iron-poor.pdf (4.25 MB)
Robbens S, Khadaroo B, Camasses A, Derelle E, Ferraz C, Inze D, Peer Y Van de, Moreau H.  2005.  Genome-wide analysis of core cell cycle genes in the unicellular green alga Ostreococcus tauri. Molecular Biology and Evolution. 22:589–597.PDF icon Robbens et al_2005_Genome-wide analysis of core cell cycle genes in the unicellular green alga.pdf (527.35 KB)
Biller SJ, Berube PM, Berta-Thompson JW, Kelly L, Roggensack SE, Awad L, Roache-Johnson KH, Ding H, Giovannoni SJ, Rocap G et al..  2014.  Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus. Scientific Data. 1:1–11.PDF icon Biller et al_2014_Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus.pdf (225.56 KB)
Collen J, Porcel B, Carré W, Ball SG, Chaparro C, Tonon T, Barbeyron T, Michel G, Noel B, Valentin K et al..  2013.  Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida. Proceedings of the National Academy of Sciences. 110:5247–5252.PDF icon Collen et al_2013_Genome structure and metabolic features in the red seaweed Chondrus crispus.pdf (1012.43 KB)
B. Belisle S, Paz AAAvila, Carpenter AR, Cormier TC, Lewis AJ, Menin LS, Oliveira DR, Song B, Szeto A, Tchantouridze EI et al..  2020.  Genome sequences of synechococcus sp. Strain MIT S9220 and cocultured cyanophage SynMITS9220M01. Microbiology Resource Announcements. 9:28–30.PDF icon Belisle et al_2020_Genome sequences of synechococcus sp.pdf (547.86 KB)
Palenik B, Ren Q, Dupont CL, Myers GS, Heidelberg JF, Badger JH, Madupu R, Nelson WC, Brinkac LM, Dodson RJ et al..  2006.  Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment. Proceedings of the National Academy of Sciences. 103:13555–13559.PDF icon Palenik et al_2006_Genome sequence of Synechococcus CC9311.pdf (1.16 MB)
Palenik B, Ren Q, Dupont CL, Myers GS, Heidelberg JF, Badger JH, Madupu R, Nelson WC, Brinkac LM, Dodson RJ et al..  2006.  Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment. Proceedings of the National Academy of Sciences of the United States of America. 103:13555–13559.
Leconte, Benites, Vannier, Wincker, Piganeau, Jaillon.  2020.  Genome resolved biogeography of mamiellales. Genes. 11:66.PDF icon Leconte et al_2020_Genome resolved biogeography of mamiellales.pdf (1.03 MB)
Palenik B, Brahamsha B, Larimer FW, Land M, Hauser L, Chain P, Lamerdin J, Regala W, Allen EE, McCarren J et al..  2003.  The genome of a motile marine Synechococcus. Nature. 424:1037–1042.PDF icon Palenik et al_2006_Genome sequence of Synechococcus CC9311.pdf (1.16 MB)
Derelle E, Ferraz C, Rombauts S, Rouze P, Worden AZ, Robbens S, Partensky F, Degroeve S, Echeynie S, Cooke R et al..  2006.  Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Proceedings of the National Academy of Sciences of the United States of America. 103:11647–11652.PDF icon Derelle et al_2006_Genome analysis of the smallest free-living eukaryote Ostreococcus tauri.pdf (1.01 MB)
Misumi O, Yoshida Y, Nishida K, Fujiwara T, Sakajiri T, Hirooka S, Nishimura Y, Kuroiwa T.  2008.  Genome analysis and its significance in four unicellular algae, Cyanidioshyzon merolae, Ostreococcus tauri, Chlamydomonas reinhardtii, and Thalassiosira pseudonana. Journal of Plant Research. 121:3–17.
Chen H, Lin H, Jiang P, Li F, Qin S.  2013.  Genetic transformation of marine cyanobacterium Synechococcus sp. CC9311 (Cyanophyceae) by electroporation. Chinese Journal of Oceanology and Limnology. 31:416–420.PDF icon Chen et al_2013_Genetic transformation of marine cyanobacterium Synechococcus sp.pdf (360.8 KB)
Nézan E, Siano R, Boulben S, Six C, Bilien G, Chèze K, Duval A, Le Panse S, Quéré J, Chomérat N.  2014.  Genetic diversity of the harmful family Kareniaceae (Gymnodiniales, Dinophyceae) in France, with the description of ¡i¿Karlodinium gentienii¡/i¿ sp. nov.: A new potentially toxic dinoflagellate. Harmful Algae. 40:75–91.PDF icon Nezan et al_2014_Genetic diversity of the harmful family Kareniaceae (Gymnodiniales,.pdf (2.6 MB)
Bendif EMahdi, Probert I, Carmichael M, Romac S, Hagino K, de Vargas C.  2014.  Genetic delineation between and within the widespread coccolithophore morpho-species Emiliania huxleyi and Gephyrocapsa oceanica (Haptophyta). Journal of Phycology. 50:140–148.PDF icon Bendif et al_2014_Genetic delineation between and within the widespread coccolithophore.pdf (722.8 KB)
Sands E, Davies S, Puxty RJohn, Vergé V, Bouget F-Y, Scanlan DJohn, Carré IAlice.  2023.  Genetic and physiological responses to light quality in a deep ocean ecotype of Ostreococcus, an ecologically important photosynthetic picoeukaryote. Journal of Experimental Botany. :erad347.PDF icon Sands et al. - 2023 - Genetic and physiological responses to light quali.pdf (1.84 MB)
Humily F, Partensky F, Six C, Farrant GK, Ratin M, Marie D, Garczarek L.  2013.  A gene island with two possible configurations is involved in chromatic acclimation in marine synechococcus. PLoS ONE. 8:e84459.PDF icon Humily et al_2013_A gene island with two possible configurations is involved in chromatic.pdf (1.54 MB)
Monier A, Sudek S, Fast NM, Worden AZ.  2013.  Gene invasion in distant eukaryotic lineages: discovery of mutually exclusive genetic elements reveals marine biodiversity. The ISME journal. 7:1764–1774.PDF icon Monier et al. - Gene invasion in distant eukaryotic lineages discovery of mutually exclusive genetic elements reveals marine biodiversit.pdf (2.08 MB)

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