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RCC834

Micromonas_pusilla

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  • E.Foullon - SEM
  • E.Foullon - Negative staining

ABS compliance

ABS = Access & Benefit Sharing according to the Nagoya Protocol to the Convention for Biological Diversity (find out more here)

ABS status: Compliant without conditions
ABS compliance details: No ABS permit needed : sampled pre-NP (no national legislation)
IDENTITY

Micromonas_pusilla

Domain: 
Eukaryota
Division: 
Chlorophyta
Class: 
Mamiellophyceae
Order: 
Mamiellales
Family: 
Mamiellaceae
Genus: 
Micromonas
Clade: 
clade C
Strain name: 
CCMP1545
Strain name synonyms: 
UTEX LB991, PLY27, CCAP LB 1965/4, MP1
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Length: 
1.50
Cell motility: 
flagellated
ORIGIN
Sampling ocean: 
Atlantic Ocean
Sampling regional sea: 
English Channel
Sampling site: 
near Plymouth
Sampling country: 
UK
Sampling ecosystem: 
coastal
Sampling date: 
Sunday, January 1, 1950
Isolation by: 
Parke M.
CULTURE CONDITIONS
RCC medium: 
RCC temperature: 
20.00
RCC transfer period weeks: 
2.00
RCC light: 
100
Remark: 
This strain should be identical to RCC 835 (=CCMP491)

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
FJ858269 Genome plastid Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 chloroplast, partial genome
FN257204 Introner-3 repeat sequence IE3.5 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-3 repeat sequence IE3.5, strain CCMP1545
GG663740 scaffold_6 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_6, whole genome shotgun sequence
JA663688 Sequence 7 from Patent EP2358882 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Sequence 7 from Patent EP2358882
AY955048 cox1 mitochondrion Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla strain CCMP1545 cytochrome c oxidase subunit I (coxI) gene, partial cds; mitochondrial
FN257205 Introner-4 repeat sequence IE4.1 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-4 repeat sequence IE4.1, strain CCMP1545
GG663741 scaffold_7 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_7, whole genome shotgun sequence
JA663700 Sequence 19 from Patent EP2358882 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Sequence 19 from Patent EP2358882
FN257190 Introner-1 repeat sequence IE1.1 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-1 repeat sequence IE1.1, strain CCMP1545
FN257206 Introner-4 repeat sequence IE4.2 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-4 repeat sequence IE4.2, strain CCMP1545
GG663742 scaffold_8 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_8, whole genome shotgun sequence
JA663788 Sequence 107 from Patent EP2358882 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Sequence 107 from Patent EP2358882
FN257191 Introner-1 repeat sequence IE1.2 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-1 repeat sequence IE1.2, strain CCMP1545
FN257207 Introner-4 repeat sequence IE4.3 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-4 repeat sequence IE4.3, strain CCMP1545
GG663743 scaffold_9 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_9, whole genome shotgun sequence
HC751732 Sequence 8823 from Patent WO2010046221 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Sequence 8823 from Patent WO2010046221
FN257192 Introner-1 repeat sequence IE1.3 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-1 repeat sequence IE1.3, strain CCMP1545
FN257208 Introner-4 repeat sequence IE4.4 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-4 repeat sequence IE4.4, strain CCMP1545
GG663744 scaffold_10 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_10, whole genome shotgun sequence
HC751931 Sequence 9022 from Patent WO2010046221 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Sequence 9022 from Patent WO2010046221
FN257193 Introner-1 repeat sequence IE1.4 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-1 repeat sequence IE1.4, strain CCMP1545
AY954994 ITS rRNA nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla strain CCMP1545 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
GG663745 scaffold_11 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_11, whole genome shotgun sequence
HC753926 Sequence 11017 from Patent WO2010046221 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Sequence 11017 from Patent WO2010046221
ACCP01000000 Genome nucleus Micromonas pusilla CCMP1545
FN257194 Introner-1 repeat sequence IE1.5 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-1 repeat sequence IE1.5, strain CCMP1545
FJ858268 Genome mitochondrion Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 mitochondrion, partial genome
GG663746 scaffold_12 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_12, whole genome shotgun sequence
HC754197 Sequence 11288 from Patent WO2010046221 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Sequence 11288 from Patent WO2010046221
KU244678 ITS rRNA nucleus Micromonas sp. RCC834 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC834 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
FN257195 Introner-2 repeat sequence IE2.1 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-2 repeat sequence IE2.1, strain CCMP1545
KR089140 NADH dehydrogenase nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla isolate 1545_2 NADH dehydrogenase gene, partial cds
GG663747 scaffold_13 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_13, whole genome shotgun sequence
KU244677 18S rRNA nucleus Micromonas sp. RCC834 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas sp. RCC834 18S ribosomal RNA gene, partial sequence
FN257196 Introner-2 repeat sequence IE2.2 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-2 repeat sequence IE2.2, strain CCMP1545
KR089201 NADH dehydrogenase nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla isolate 1545_1 NADH dehydrogenase gene, partial cds
GG663748 scaffold_14 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_14, whole genome shotgun sequence
KR089141 ABC transporter nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla isolate 1545_1 ABC transporter gene, partial cds
FN257197 Introner-2 repeat sequence IE2.3 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-2 repeat sequence IE2.3, strain CCMP1545
KF754357 PHY nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla strain CCMP1545 phytochrome (PHY) gene, complete cds
GG663749 scaffold_15 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_15, whole genome shotgun sequence
KR089152 ABC transporter nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla isolate 1545_2 ABC transporter gene, partial cds
FN257198 Introner-2 repeat sequence IE2.4 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-2 repeat sequence IE2.4, strain CCMP1545
AY955031 rbcL plastid Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla strain CCMP1545 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast
GG663750 scaffold_16 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_16, whole genome shotgun sequence
KR089156 actin nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla isolate 1545_1 actin gene, partial cds
FN257199 Introner-2 repeat sequence IE2.5 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-2 repeat sequence IE2.5, strain CCMP1545
GG663735 scaffold_1 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_1, whole genome shotgun sequence
GG663751 scaffold_17 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_17, whole genome shotgun sequence
KR089178 actin nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla isolate 1545_2 actin gene, partial cds
FN257200 Introner-3 repeat sequence IE3.1 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-3 repeat sequence IE3.1, strain CCMP1545
GG663736 scaffold_2 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_2, whole genome shotgun sequence
GG663752 scaffold_18 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_18, whole genome shotgun sequence
AY955014 beta-tubulin gene nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla strain CCMP1545 beta-tubulin gene, partial cds
FN257201 Introner-3 repeat sequence IE3.2 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-3 repeat sequence IE3.2, strain CCMP1545
GG663737 scaffold_3 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_3, whole genome shotgun sequence
GG663753 scaffold_19 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_19, whole genome shotgun sequence
KR089153 Ca2+ ATPase nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla isolate 1545_2 Ca2+ ATPase gene, partial cds
FN257202 Introner-3 repeat sequence IE3.3 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-3 repeat sequence IE3.3, strain CCMP1545
GG663738 scaffold_4 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_4, whole genome shotgun sequence
GG663754 scaffold_20 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_20, whole genome shotgun sequence
KR089165 Ca2+ ATPase nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla isolate 1545_1 Ca2+ ATPase gene, partial cds
FN257203 Introner-3 repeat sequence IE3.4 nucleus Micromonas pusilla Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla Introner-3 repeat sequence IE3.4, strain CCMP1545
GG663739 scaffold_5 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_5, whole genome shotgun sequence
GG663755 scaffold_21 nucleus Micromonas pusilla CCMP1545 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas Micromonas pusilla CCMP1545 genomic scaffold MICPUCscaffold_21, whole genome shotgun sequence

Associated references

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Fiore CL, Alexander H, Soule MCKido, Kujawinski EB.  2018.  A phosphate starvation response gene (psr1-like) is present and expressed in Micromonas pusilla and other marine algae. bioRxiv. PDF icon Download pdf (666.41 KB)
Simon N, Foulon E, Grulois D, Six C, Desdevises Y, Latimier M, Le Gall F, Tragin M, Houdan A, Derelle E et al..  2017.  Revision of the genus micromonas manton et parke (chlorophyta, mamiellophyceae), of the type species m. pusilla (butcher) manton & parke and of the species m. commoda van baren, bachy and worden and description of two new species based on the genetic. Protist. 168:612–635. PDF icon Download pdf (7.29 MB)
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Barton S, Yvon-Durocher G.  2019.  Quantifying the temperature dependence of growth rate in marine phytoplankton within and across species. Limnology and Oceanography.
Demory D, Baudoux A-claire, Monier A, Simon N, Six C, Ge P, Rigaut-jalabert F, Marie D, Sciandra A, Bernard O et al..  2019.  Picoeukaryotes of the Micromonas genus: sentinels of a warming ocean. The ISME Journal. 13:132–146. PDF icon Download pdf (2.51 MB)
Demory D, Weitz JS, Baudoux A-claire, Touzeau S, Simon N, Rabouille S, Sciandra A, Bernard O.  2020.  A thermal trade-off between viral production and degradation drives phytoplankton-virus population dynamics. bioRxiv. :2020.08.18.256156. PDF icon Download pdf (5.32 MB)