RCC5583

Thalassiosira_sp

Distributed

Cryopreserved only

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  • D. Saenz - SEM - Phenom Pro
  • D. Saenz - SEM - Phenom Pro
  • D. Saenz - Direct microscope - Nikon eclipse - x100
  • D. Saenz - Direct microscope - Nikon eclipse - x100
  • D. Saenz - Direct microscope - Nikon eclipse - x100
  • D. Saenz - Direct microscope - Nikon eclipse - x100
  • D. Saenz - SEM - Phenom Pro

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ABS compliance

Are users allowed to use this biological resource without applying for formal ABS authorization?
Yes - (A) Country of origin is not party to the NP and no ABS-like authorization required
ABS = Access & Benefit Sharing according to the Nagoya Protocol (NP) to the Convention for Biological Diversity (find out more here)
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IDENTITY

Thalassiosira_sp

Domain: 
Eukaryota
Division: 
Heterokontophyta
Class: 
Mediophyceae
Order: 
Thalassiosirales
Family: 
Thalassiosiraceae
Genus: 
Thalassiosira
Strain name: 
GE_AL_AM_SORT_539
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
MORPHOLOGY
Cell assemblage: 
chains
Cell shape: 
cylindrical
Length: 
10.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Arctic Ocean
Sampling regional sea: 
Baffin Bay
Sampling country: 
Canada
Sampling substrate: 
water
Sampling water type: 
marine
Sampling ecosystem: 
pelagic
Sampling cruise: 
Green Edge Amundsen
Sampling station: 
G600
Sampling depth (m): 
20
Sampling date: 
Sunday, July 3, 2016
Isolation by: 
A. Lopes
Isolation method: 
Cell sorting
CULTURE CONDITIONS
RCC medium: 
L1
RCC temperature: 
4.00
RCC transfer period weeks: 
4.00
RCC light: 
100
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Thursday, October 26, 2017
Identification by: 
C. Ribeiro
Identification method: 
sequence
Sampling CTD: 
148
Sampling bottle: 
17
Sampling by: 
M. Tragin
Isolation growth temperature: 
4.00
Isolation light: 
100

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
MN834004 ITS rRNA nucleus Thalassiosira sp. Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; unclassified Thalassiosira Thalassiosira sp. strain RCC5583 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence
MH765020 18S rRNA nucleus Thalassiosira sp. RCC5583 Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira Thalassiosira sp. RCC5583 small subunit ribosomal RNA gene, partial sequence

Associated references

Displaying 1 - 1 of 1
Ribeiro CGérikas, Santos ALopes dos, Gourvil P, Le Gall F, Marie D, Tragin M, Probert I, Vaulot D.  2020.  Culturable diversity of Arctic phytoplankton during pack ice melting. Elementa: Science of the Anthropocene. 8:6. PDF icon Download pdf (6.82 MB)