RCC5327

Thalassiosira_sp

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Cryopreserved only

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  • P. Gourvil - SEM - Phenom Pro - 455
  • D. Saenz - SEM - Phenom Pro
  • D. Saenz - SEM - Phenom Pro
  • C. Gerikas-Ribeiro - Direct microscope - Nikon eclipse - x100
  • C. Gerikas-Ribeiro - Direct microscope - Nikon eclipse - x100
  • C. Gerikas-Ribeiro - Direct microscope - Nikon eclipse - x100
  • C. Gerikas-Ribeiro - Direct microscope - Nikon eclipse - x100

Exclusive Economic Zones (EEZs) are indicated on the map.

ABS compliance

Are users allowed to use this biological resource without applying for formal ABS authorization?
Yes - (A) Country of origin is not party to the NP and no ABS-like authorization required
ABS = Access & Benefit Sharing according to the Nagoya Protocol (NP) to the Convention for Biological Diversity (find out more here)
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IDENTITY

Thalassiosira_sp

Domain: 
Eukaryota
Division: 
Heterokontophyta
Class: 
Mediophyceae
Order: 
Thalassiosirales
Family: 
Thalassiosiraceae
Genus: 
Thalassiosira
Strain name: 
GE_PG_IC_SingleCell_39
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
MORPHOLOGY
Cell assemblage: 
chains
Cell shape: 
cylindrical
Length: 
10.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Arctic Ocean
Sampling regional sea: 
Baffin Bay
Sampling site: 
Baffin Island
Sampling country: 
Canada
Sampling substrate: 
ice
Sampling water type: 
brackish
Sampling ecosystem: 
coastal
Sampling comment: 
0-3 cm
Sampling cruise: 
Green Edge Ice Camp
Sampling station: 
Qikiqtarjuaq
Sampling depth (m): 
0
Sampling date: 
Saturday, July 9, 2016
Isolation by: 
Gourvil P.
Isolation method: 
Micropipette (1 cell)
CULTURE CONDITIONS
RCC medium: 
L1
RCC temperature: 
4.00
RCC transfer period weeks: 
4.00
RCC light: 
100
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Thursday, October 26, 2017
Identification by: 
C. Ribeiro
Identification method: 
sequence
Sampling CTD: 
191
Sampling by: 
P. Gourvil
Isolation growth temperature: 
4.00
Isolation light: 
100

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
MH764800 18S rRNA nucleus Thalassiosira sp. RCC5327 Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira Thalassiosira sp. RCC5327 small subunit ribosomal RNA gene, partial sequence
MN833972 ITS rRNA nucleus Thalassiosira sp. Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; unclassified Thalassiosira Thalassiosira sp. strain RCC5327 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence

Associated references

Displaying 1 - 1 of 1
Ribeiro CGérikas, Santos ALopes dos, Gourvil P, Le Gall F, Marie D, Tragin M, Probert I, Vaulot D.  2020.  Culturable diversity of Arctic phytoplankton during pack ice melting. Elementa: Science of the Anthropocene. 8:6. PDF icon Download pdf (6.82 MB)