RCC2318

Chaetoceros_neogracilis

Not distributed

Cryopreserved only

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IDENTITY

Chaetoceros_neogracilis

Domain: 
Eukaryota
Division: 
Heterokontophyta
Class: 
Mediophyceae
Order: 
Chaetocerotales
Family: 
Chaetocerotaceae
Genus: 
Chaetoceros
Clade: 
clade III
Strain name: 
MALINA FT99.3.N1
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
cylindrical
Length: 
7.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Arctic Ocean
Sampling regional sea: 
Beaufort Sea
Sampling country: 
Canada
Sampling ecosystem: 
pelagic
Sampling cruise: 
MALINA
Sampling station: 
620
Sampling depth (m): 
65
Sampling date: 
Tuesday, August 11, 2009
Isolation by: 
Vaulot D.
Isolation method: 
Flow cytometry sorting (400 cells)
CULTURE CONDITIONS
RCC medium: 
K/2+Si
RCC temperature: 
4.00
RCC transfer period weeks: 
8.00
RCC light: 
20
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Friday, October 29, 2010
Identification method: 
sequence
Sampling CTD: 
99
Sampling bottle: 
5
Sampling by: 
Vaulot D.
Isolation growth temperature: 
4.00
Isolation medium: 
K/2 no germanium
Isolation light: 
20

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
KT860534 ITS rRNA nucleus Chaetoceros cf. neogracilis clade II Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Chaetocerotophycidae; Chaetocerotales; Chaetocerotaceae; Chaetoceros Chaetoceros cf. neogracilis clade II culture RCC:2318 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
JN934684 18S rRNA nucleus Chaetoceros cf. neogracile Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Chaetocerotophycidae; Chaetocerotales; Chaetocerotaceae; Chaetoceros Chaetoceros cf. neogracile strain RCC2318 18S ribosomal RNA gene, partial sequence
JQ995457 28S rRNA nucleus Chaetoceros cf. neogracile Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Chaetocerotophycidae; Chaetocerotales; Chaetocerotaceae; Chaetoceros Chaetoceros cf. neogracile strain RCC2318 28S ribosomal RNA gene, partial sequence

Associated references

Displaying 1 - 1 of 1
Balzano S, Percopo I, Siano R, Gourvil P, Chanoine M, Marie D, Vaulot D, Sarno D.  2017.  Morphological and genetic diversity of Beaufort Sea diatoms with high contributions from the Chaetoceros neogracilis species complex. Journal of Phycology. 53:161–187. PDF icon Download pdf (3.54 MB)