RCC2275

Chaetoceros_neogracilis

Not distributed

Cryopreserved only

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IDENTITY

Chaetoceros_neogracilis

Domain: 
Eukaryota
Division: 
Heterokontophyta
Class: 
Mediophyceae
Order: 
Chaetocerotales
Family: 
Chaetocerotaceae
Genus: 
Chaetoceros
Clade: 
clade I
Strain name: 
MALINA S472
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Contaminant type: 
Flagellate
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
cylindrical
Length: 
5.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Arctic Ocean
Sampling regional sea: 
Beaufort Sea
Sampling country: 
Canada
Sampling ecosystem: 
pelagic
Sampling cruise: 
MALINA
Sampling station: 
620
Sampling depth (m): 
3
Sampling date: 
Tuesday, August 11, 2009
Isolation by: 
Vaulot D.
Isolation method: 
Flow cytometry sorting (500 cells)
CULTURE CONDITIONS
RCC medium: 
K/2+Si
RCC temperature: 
4.00
RCC transfer period weeks: 
4.00
RCC light: 
100
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Friday, October 29, 2010
Identification method: 
sequence
Sampling CTD: 
99
Sampling bottle: 
15
Sampling by: 
Marie D.
Isolation growth temperature: 
4.00
Isolation medium: 
K/2
Isolation light: 
100

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
JQ995449 28S rRNA nucleus Chaetoceros cf. neogracile strain RCC2275 28S ribosomal RNA gene, partial sequence
LN735337 16S rRNA plastid Chaetoceros neogracile Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Chaetocerotophycidae; Chaetocerotales; Chaetocerotaceae; Chaetoceros Chaetoceros neogracile chloroplast partial 16S rRNA gene, strain RCC 2275
KT861186 18S rRNA nucleus Chaetoceros neogracile Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Chaetocerotophycidae; Chaetocerotales; Chaetocerotaceae; Chaetoceros Chaetoceros neogracile strain RCC2275 isolate ZZ0044477 18S ribosomal RNA gene, partial sequence
KT860527 ITS rRNA nucleus Chaetoceros cf. neogracilis clade I Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Chaetocerotophycidae; Chaetocerotales; Chaetocerotaceae; Chaetoceros Chaetoceros cf. neogracilis clade I culture RCC:2275 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence

Associated references

Displaying 1 - 1 of 1
Balzano S, Percopo I, Siano R, Gourvil P, Chanoine M, Marie D, Vaulot D, Sarno D.  2017.  Morphological and genetic diversity of Beaufort Sea diatoms with high contributions from the Chaetoceros neogracilis species complex. Journal of Phycology. 53:161–187. PDF icon Download pdf (3.54 MB)