RCC2005

Pseudo-nitzschia_arctica

Distributed

Print

NB: Empty fields are hidden.

Please login or register to order strains

Login

Register

Exclusive Economic Zones (EEZs) are indicated on the map.

ABS compliance

Are users allowed to use this biological resource without applying for formal ABS authorization?
Yes - (A) Country of origin is not party to the NP and no ABS-like authorization required
ABS = Access & Benefit Sharing according to the Nagoya Protocol (NP) to the Convention for Biological Diversity (find out more here)
ABS Clearing House EMBRC step by step guide
IDENTITY

Pseudo-nitzschia_arctica

Domain: 
Eukaryota
Division: 
Heterokontophyta
Class: 
Bacillariophyceae
Order: 
Bacillariales
Family: 
Bacillariaceae
Genus: 
Pseudo-nitzschia
Strain name: 
MALINA E62 PG4
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell assemblage: 
chains
Cell shape: 
elongated
Length: 
80.00
ORIGIN
Sampling ocean: 
Arctic Ocean
Sampling regional sea: 
Beaufort Sea
Sampling country: 
Canada
Sampling ecosystem: 
coastal
Sampling cruise: 
MALINA
Sampling station: 
690
Sampling depth (m): 
29
Sampling date: 
Saturday, August 1, 2009
Isolation by: 
Gourvil P.
Isolation method: 
micropipette
CULTURE CONDITIONS
RCC medium: 
K+Si
RCC temperature: 
4.00
RCC transfer period weeks: 
3.00
RCC light: 
10
Remark: 
This strain does not seem to be toxic with a domoic acid production inferior to detection limit of Elisa test (data provided by R. Siano, IFREMER Brest).
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Wednesday, April 21, 2010
Identification method: 
sequence
Sampling CTD: 
31
Sampling bottle: 
5
Sampling by: 
Vaulot D.
Isolation preculture number: 
E62
Isolation growth temperature: 
4.00
Isolation medium: 
K+Si
Isolation light: 
10

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
JQ995419 28S rRNA nucleus Pseudo-nitzschia sp. SB-2012 Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Bacillariales; Bacillariaceae; Pseudo-nitzschia; unclassified Pseudo-nitzschia Pseudo-nitzschia sp. SB-2012 strain RCC2005 28S ribosomal RNA gene, partial sequence
LN735319 16S rRNA plastid Ankylochrysis sp. RCC2005 Eukaryota; Stramenopiles; Pelagophyceae; Sarcinochrysidales; Sarcinochrysidaceae; Ankylochrysis Ankylochrysis sp. RCC2005 chloroplast partial 16S rRNA gene, strain RCC 2005

Associated references

Displaying 1 - 2 of 2
Balzano S, Percopo I, Siano R, Gourvil P, Chanoine M, Marie D, Vaulot D, Sarno D.  2017.  Morphological and genetic diversity of Beaufort Sea diatoms with high contributions from the Chaetoceros neogracilis species complex. Journal of Phycology. 53:161–187. PDF icon Download pdf (3.54 MB)
Percopo I, Ruggiero MValeria, Balzano S, Gourvil P, Lundholm N, Siano R, Tammilehto A, Vaulot D, Sarno D.  2016.  Pseudo-nitzschia arctica sp. nov., a new cold-water cryptic Pseudo-nitzschia species within the P. pseudodelicatissima complex. Journal of Phycology. 52:184–199. PDF icon Download pdf (771.04 KB)