Marine Synechococcus

These strains are being characterized. Clade corresponds to 16S rRNA phylogeny.

This shortlist returns 581 RCC strains

Title Genus Strain name Clade Phenotype pigment Sampling ocean Sampling station Sampling depth (m) Distributed
RCC316 Synechococcus PROSOPE_37-2 subcluster 5.1 - clade XVI Syn type 3c Mediterranean Sea 3 110
RCC317 Synechococcus PROSOPE_85-6 subcluster 5.1 - clade XVI Syn type 3d Mediterranean Sea 7 90
RCC318 Synechococcus PROSOPE_41-3 subcluster 5.1 - clade XVI Syn type 3dA Mediterranean Sea 5 65
RCC319 Synechococcus PROSOPE_157-21 subcluster 5.1 - clade VIb Syn type 3a Mediterranean Sea DYF 15
RCC320 Synechococcus PROSOPE_157-13 subcluster 5.1 - clade Via Syn type 3c? Mediterranean Sea DYF 15
RCC321 Synechococcus PROSOPE_32-1 subcluster 5.1 - clade IIe Syn type 3a Mediterranean Sea 3 5
RCC322 Synechococcus PROSOPE_117-1 subcluster 5.1 - clade VIb Syn type 3a Mediterranean Sea 8 5
RCC323 Synechococcus PROSOPE_97-4 subcluster 5.1 - clade VIb Syn type 2A Mediterranean Sea 7 5
RCC324 Synechococcus PROSOPE_53-4 subcluster 5.1 - clade Via Syn type 3a Mediterranean Sea 5 5
RCC325 Synechococcus PROSOPE_153-3 subcluster 5.1 - clade Via Syn type 3c Mediterranean Sea DYF 25
RCC326 Synechococcus PPROSOPE_53-19 subcluster 5.1 - clade Via Syn type 3b Mediterranean Sea 5 5
RCC327 Synechococcus PROSOPE_25-2 Syn type 3a Mediterranean Sea 3 25
RCC328 Synechococcus PROSOPE_135-5 subcluster 5.1 - clade Ib Syn type 3dA Mediterranean Sea 9 30
RCC329 Synechococcus PROSOPE_77-2 subcluster 5.1 - clade Via Syn type 3a Mediterranean Sea MIO 5
RCC359 Synechococcus RA000711-27-14 subcluster 5.1 - clade VIb Syn type 3a Atlantic Ocean Roscoff Astan 0
RCC367 Synechococcus PROSOPE_25 subcluster 5.1 - clade VIb Syn type 3a Mediterranean Sea 3 25
RCC374 Synechococcus PROSOPE_49-2 subcluster 5.1 - clade IIe Syn type 3a Mediterranean Sea 5 25
RCC394 Synechococcus PROSOPE_1-9 subcluster 5.1 - clade IIh Syn type 3dB Atlantic Ocean UPW 5
RCC411 Synechococcus BL_17/4 Syn type 2 Mediterranean Sea 0
RCC412 Synechococcus BL_10 Syn type 2 Mediterranean Sea 0
RCC413 Synechococcus RA000609-11-2 Syn type 1 Atlantic Ocean Roscoff Astan 0
RCC442 Synechococcus PROSOPE_2-16 subcluster 5.1 - clade IIh Syn type 3d Atlantic Ocean UPW 5
RCC476 Synechococcus REDSEA_9821 Syn type 3a Indian Ocean 0
RCC477 Synechococcus REDSEA_9823 Syn type 3a Indian Ocean A 120
RCC478 Synechococcus REDSEA_9827 Syn type 3c Indian Ocean A 20
RCC487 Synechococcus CA MAU_St8_1-2 Syn type 1 Pacific Ocean 8 0
RCC508 Synechococcus BL_36_Syn subcluster 5.1 - clade VIb Syn type 3a Mediterranean Sea Blanès 0
RCC509 Synechococcus BL_38 subcluster 5.2 ? Syn type 1 Mediterranean Sea Blanès 0
RCC510 Synechococcus BL_38-7 Syn type 1 Mediterranean Sea Blanès 0
RCC511 Synechococcus BL_48 subcluster 5.1 - clade Via Syn type 3c Mediterranean Sea Blanès 0
RCC512 Synechococcus BL_59-8 Syn type 1 Mediterranean Sea Blanès 0
RCC513 Synechococcus BL_103 Syn type 3b or 3d Mediterranean Sea CANYON 1800
RCC514 Synechococcus BL_104 Syn type 3b or 3d Mediterranean Sea CANYON 1800
RCC515 Synechococcus BL_107 subcluster 5.1 - clade IVa Syn type 3dA Mediterranean Sea CANYON 1800
RCC516 Synechococcus BL_108 Syn type 3b or 3d Mediterranean Sea CANYON 1800
RCC517 Synechococcus BL_155 Syn type 3a Mediterranean Sea Blanès 0
RCC523 Synechococcus PROSOPE_110 subcluster 5.1 - clade Via Syn type 3a Mediterranean Sea 8 70
RCC524 Synechococcus PROSOPE_107 subcluster 5.1 - clade Ia Syn type 3d Mediterranean Sea 8 90
RCC525 Synechococcus PROSOPE_130 subcluster 5.1 - clade VIc Syn type 3c Mediterranean Sea 9 65
RCC526 Synechococcus PROSOPE_17 Syn type 3c Mediterranean Sea 3 80
RCC527 Synechococcus PROSOPE_101 subcluster 5.1 - clade Via Syn type 3d Mediterranean Sea 8 110
RCC528 Synechococcus PROSOPE_70 subcluster 5.1 - clade Via Syn type 3c Mediterranean Sea MIO 50
RCC532 Synechococcus REDSEA_15-1 Syn type 3c Indian Ocean A 80
RCC539 Synechococcus WH8102 subcluster 5.1 - clade IIIa Syn type 3c Atlantic Ocean
RCC540 Synechococcus RS9901 subcluster 5.1 - clade IX Syn type 3b or 3d Indian Ocean 1
RCC541 Synechococcus RS9902 subcluster 5.1 - clade IIa Syn type 3c Indian Ocean 1
RCC542 Synechococcus RS9903 subcluster 5.1 - clade IIa Syn type 3c Indian Ocean 10
RCC543 Synechococcus RS9904 subcluster 5.1 - clade IIa Syn type 3c Indian Ocean 10
RCC544 Synechococcus RS9905 subcluster 5.1 - clade IIIa Syn type 3c Indian Ocean 10
RCC545 Synechococcus RS9906 subcluster 5.1 - clade VIII Syn type 1 Indian Ocean 10

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