Marine Synechococcus

These strains are being characterized. Clade corresponds to 16S rRNA phylogeny.

This shortlist returns 581 RCC strains

Title Genus Strain name Clade Phenotype pigment Sampling ocean Sampling station Sampling depth (m) Distributed
RCC1695 Synechococcus MICROVIR 6CR_4-1 subcluster 5.1 - clade IVa Syn type 3a Atlantic Ocean 11 10
RCC1696 Synechococcus MICROVIR 4CR_3B subcluster 5.1 - clade Ib Syn type 3a? Atlantic Ocean 18 10
RCC1700 Synechococcus MICROVIR 16K_1 subcluster 5.1 - clade Ib Atlantic Ocean 16 10
RCC1701 Synechococcus MICROVIR 16CH_1 subcluster 5.1 - clade IVa Syn type 3d Atlantic Ocean 16 10
RCC1702 Synechococcus MICROVIR 17CH_4-1 subcluster 5.1 - clade Ib Atlantic Ocean 8 10
RCC1703 Synechococcus MICROVIR 17CR_4-6 subcluster 5.1 - clade Ib Atlantic Ocean 8 10
RCC1705 Synechococcus MICROVIR 17CR_3 subcluster 5.1 - clade Ib Atlantic Ocean 8 10
RCC1706 Synechococcus MICROVIR 17K_2 subcluster 5.1 - clade Ib Atlantic Ocean 8 10
RCC1707 Synechococcus MICROVIR 17K_3 subcluster 5.1 - clade IVa Atlantic Ocean 8 10
RCC1708 Synechococcus MICROVIR 19K_2 subcluster 5.1 - clade Ib Atlantic Ocean 1 10
RCC1748 Synechococcus RE070718_1 Atlantic Ocean Roscoff Estacade 0
RCC1750 Synechococcus RE070718_6 Atlantic Ocean Roscoff Estacade 0
RCC1932 Synechococcus RAPROCAN 241 Atlantic Ocean 2 15
RCC2032 Synechococcus WH8016 subcluster 5.1 - clade Ib Syn type 3aA Atlantic Ocean Woods Hole
RCC2033 Synechococcus WH8109 subcluster 5.1 - clade IIb Syn type 3bB Atlantic Ocean
RCC2034 Synechococcus WH8101 subcluster 5.1 - clade VIII Syn type 1 Atlantic Ocean Woods Hole
RCC2035 Synechococcus Syn 20 subcluster 5.1 - clade Ib Syn type 3a Atlantic Ocean 2
RCC2319 Synechococcus MINSyn129-20m-11-A Clonal subcluster 5.3 Syn type 3dB Mediterranean Sea 17 20
RCC2366 Synechococcus WH8103Syn Clonal subcluster 5.1 - clade IIIa Syn type 3bB Atlantic Ocean
RCC2367 Synechococcus MAX42 Clonal subcluster 5.1 - clade IIIa Syn type 3c Atlantic Ocean 120
RCC2368 Synechococcus MEDNS5 Clonal subcluster 5.1 - clade Via Syn type 3c Mediterranean Sea MA1 80
RCC2369 Synechococcus PROSOPE_1-9 Clonal subcluster 5.1 - clade IIh Syn type 3dB Atlantic Ocean UPW 5
RCC2370 Synechococcus PROSOPE_2-16 Clonal subcluster 5.1 - clade IIh Syn type 3d Atlantic Ocean UPW 5
RCC2371 Synechococcus BL_38 Clonal subcluster 5.2 ? Syn type 1 Mediterranean Sea Blanès 0
RCC2372 Synechococcus RS9905 Clonal subcluster 5.1 - clade IIIa Syn type 3c Indian Ocean 10
RCC2373 Synechococcus WH8018 Clonal subcluster 5.1 - clade VIc Syn type 2a Atlantic Ocean Woods Hole
RCC2374 Synechococcus A15-62 Clonal subcluster 5.1 - clade Iic Syn type 3dB Atlantic Ocean 15 15
RCC2375 Synechococcus A15-46 Clonal subcluster 5.1 - clade V Syn type 2a Atlantic Ocean 11 70
RCC2376 Synechococcus RS9902 Clonal subcluster 5.1 - clade IIa Syn type 3c Indian Ocean 1
RCC2377 Synechococcus UW01 Clonal subcluster 5.1 - clade V Syn type 3a Pacific Ocean 0
RCC2378 Synechococcus A15-127 Clonal subcluster 5.1 - clade WPC1 Syn type 3c Atlantic Ocean 31 45
RCC2379 Synechococcus BOUM 118-1 subcluster 5.1 - clade IIIa Syn type 3c Mediterranean Sea C 5
RCC2380 Synechococcus ROS8604 Syn Clonal subcluster 5.1 - clade Ib Syn type 3a Atlantic Ocean Roscoff Estacade 0
RCC2381 Synechococcus PROSOPE_97-4 Clonal subcluster 5.1 - clade VIb Syn type 2a Mediterranean Sea 7 5
RCC2382 Synechococcus RS9907 Clonal subcluster 5.1 - clade IIa Syn type 3a Indian Ocean 10
RCC2383 Synechococcus RS9909 Clonal subcluster 5.1 - clade VIII Syn type 1 Indian Ocean 10
RCC2384 Synechococcus RS9912 Clonal subcluster 5.1 - clade IIa Syn type 3a Indian Ocean 10
RCC2385 Synechococcus MICROVIR 10CR_4-3 Clonal subcluster 5.1 - clade Ib Syn type 3aA Atlantic Ocean 18 25
RCC2414 Synechococcus BOUM113-1 subcluster 5.1 - clade Via Syn type 3c Mediterranean Sea 3 5
RCC2415 Synechococcus BOUM113-2 subcluster 5.1 - clade IIIa Syn type 3c Mediterranean Sea 3 5
RCC2416 Synechococcus BOUM113-3 subcluster 5.1 - clade IIIa Syn type 3c Mediterranean Sea 3 5
RCC2417 Synechococcus BOUM104-4 subcluster 5.1 - clade VIc Syn type 3c Mediterranean Sea 7 5
RCC2418 Synechococcus BOUM104-5 subcluster 5.1 - clade IIIa Syn type 3c Mediterranean Sea 7 5
RCC2419 Synechococcus BOUM68-1 subcluster 5.1 - clade IIIa Syn type 3c Mediterranean Sea A 12
RCC2420 Synechococcus BOUM102-1 subcluster 5.1 - clade Via Syn type 3c Mediterranean Sea 11 5
RCC2421 Synechococcus BOUM118-1 subcluster 5.1 - clade IIIa Syn type 3c Mediterranean Sea C 5
RCC2422 Synechococcus BOUM112-1 subcluster 5.1 - clade IIIa Syn type 3c Mediterranean Sea 19 5
RCC2423 Synechococcus BOUM112-2 subcluster 5.1 - clade IIIa Syn type 3c Mediterranean Sea 19 5
RCC2424 Synechococcus BOUM109-1 subcluster 5.1 - clade IIIa Syn type 3c Mediterranean Sea B 5
RCC2425 Synechococcus BOUM109-2 subcluster 5.1 - clade IIIa Syn type 3c Mediterranean Sea B 5

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