LN735436 |
16S rRNA |
plastid |
Phaeodactylum sp. RCC641 |
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum |
Phaeodactylum sp. RCC641 chloroplast partial 16S rRNA gene, strain RCC 641 |
KT860977 |
18S rRNA |
nucleus |
Phaeodactylum tricornutum |
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum |
Phaeodactylum tricornutum strain RCC641 isolate ZZ0045323 18S ribosomal RNA gene, partial sequence |
MG891904 |
16S rRNA |
|
Antarctobacter sp. |
Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Antarctobacter |
Antarctobacter sp. strain DB124 16S ribosomal RNA gene, partial sequence |
MG891905 |
16S rRNA |
|
Alcanivorax sp. |
Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax |
Alcanivorax sp. strain DB126 16S ribosomal RNA gene, partial sequence |
KT860882 |
18S rRNA |
nucleus |
Micromonas pusilla |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas |
Micromonas pusilla strain RCC647 isolate ZZ0045324 18S ribosomal RNA gene, partial sequence |
KU244652 |
ITS rRNA |
nucleus |
Micromonas sp. RCC647 |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas |
Micromonas sp. RCC647 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence |
KU244651 |
18S rRNA |
nucleus |
Micromonas sp. RCC647 |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas |
Micromonas sp. RCC647 18S ribosomal RNA gene, partial sequence |
AF397724 |
ITS rRNA |
|
|
|
WH8018 |
JF307570 |
petB |
|
Synechococcus sp. WH 8018 |
Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus |
Synechococcus sp. WH 8018 cytochrome b6 gene, partial cds |
LN735437 |
16S rRNA |
plastid |
Porphyridium aerugineum |
Eukaryota; Rhodophyta; Bangiophyceae; Porphyridiales; Porphyridiaceae; Porphyridium |
Porphyridium aerugineum chloroplast partial 16S rRNA gene, strain RCC 652 |
ERR3497258 |
Transcriptome |
|
Chroodactylon ornatum |
|
|
KT861302 |
18S rRNA |
nucleus |
Chrysochromulina sp. RCC656 |
Eukaryota; Haptophyceae; Prymnesiales; Chrysochromulinaceae; Chrysochromulina |
Chrysochromulina sp. RCC656 isolate ZZ0016348 18S ribosomal RNA gene, partial sequence |
KF501030 |
18S rRNA |
nucleus |
Micromonas pusilla |
Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales; Micromonas |
Micromonas pusilla isolate M_RCC658 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence |
KF501019 |
18S rRNA |
nucleus |
Micromonas pusilla |
Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales; Micromonas |
Micromonas pusilla isolate M_RCC658 small subunit ribosomal RNA gene, partial sequence |
MF179481 |
18S rRNA |
nucleomorph |
Hemiselmis rufescens |
Eukaryota; Cryptophyta; Cryptomonadales; Hemiselmidaceae; Hemiselmis |
Hemiselmis rufescens voucher RCC 659 18S ribosomal RNA gene, partial sequence; nucleomorph |
MF179475 |
18S rRNA |
nucleus |
Hemiselmis rufescens |
Eukaryota; Cryptophyta; Cryptomonadales; Hemiselmidaceae; Hemiselmis |
Hemiselmis rufescens voucher RCC 659 18S ribosomal RNA gene, partial sequence |
MF574712 |
28S rRNA |
nucleus |
Hemiselmis rufescens |
Eukaryota; Cryptophyta; Cryptomonadales; Hemiselmidaceae; Hemiselmis |
Hemiselmis rufescens voucher RCC 659 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence |
KT860554 |
18S rRNA |
nucleus |
Hemiselmis sp. RCC659 |
Eukaryota; Cryptophyta; Cryptomonadales; Hemiselmidaceae; Hemiselmis |
Hemiselmis sp. RCC659 isolate ZZ0016352 18S ribosomal RNA gene, partial sequence |
KT878682 |
18S rRNA |
nucleus |
Hemiselmis sp. RCC659 |
Eukaryota; Cryptophyta; Cryptomonadales; Hemiselmidaceae; Hemiselmis |
Hemiselmis sp. RCC659 isolate ZZ0016349 18S ribosomal RNA gene, partial sequence |
KT878715 |
18S rRNA |
nucleus |
Hemiselmis sp. RCC660 |
Eukaryota; Cryptophyta; Cryptomonadales; Hemiselmidaceae; Hemiselmis |
Hemiselmis sp. RCC660 isolate ZZ0013552 18S ribosomal RNA gene, partial sequence |
KT860883 |
18S rRNA |
nucleus |
Chlorella stigmatophora |
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella |
Chlorella stigmatophora strain RCC661 isolate ZZ0045325 18S ribosomal RNA gene, partial sequence |
MG891906 |
16S rRNA |
|
Alcanivorax sp. |
Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax |
Alcanivorax sp. strain DB127 16S ribosomal RNA gene, partial sequence |
MG891907 |
16S rRNA |
|
Micrococcus sp. |
Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus |
Micrococcus sp. strain DB132 16S ribosomal RNA gene, partial sequence |
KT861326 |
18S rRNA |
nucleus |
Rhodomonas sp. RCC662 |
Eukaryota; Cryptophyta; Pyrenomonadales; Pyrenomonadaceae; Rhodomonas |
Rhodomonas sp. RCC662 isolate ZZ0013553 18S ribosomal RNA gene, partial sequence |
KT860884 |
18S rRNA |
nucleus |
Chlorella sp. RCC664 |
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella |
Chlorella sp. RCC664 isolate ZZ0045326 18S ribosomal RNA gene, partial sequence |
KT861032 |
18S rRNA |
nucleus |
Apedinella spinifera |
Eukaryota; Stramenopiles; Dictyochophyceae; Pedinellales; Apedinella |
Apedinella spinifera strain RCC665 isolate ZZ0013555 18S ribosomal RNA gene, partial sequence |
KT860676 |
18S rRNA |
nucleus |
Chlamydomonadales sp. RCC666 |
Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; unclassified Chlamydomonadales |
Chlamydomonadales sp. RCC666 isolate ZZ0013557 18S ribosomal RNA gene, partial sequence |
KT861033 |
18S rRNA |
nucleus |
Pseudopedinella sp. RCC668 |
Eukaryota; Stramenopiles; Dictyochophyceae; Pedinellales; Pseudopedinella |
Pseudopedinella sp. RCC668 isolate ZZ0013558 18S ribosomal RNA gene, partial sequence |
KT860677 |
18S rRNA |
nucleus |
Pyramimonas sp. RCC669 |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Pyramimonadales; Pyramimonas |
Pyramimonas sp. RCC669 isolate ZZ0013559 18S ribosomal RNA gene, partial sequence |
KT861310 |
18S rRNA |
nucleus |
Imantonia sp. RCC671 |
Eukaryota; Haptophyceae; Prymnesiales; Prymnesiaceae; Imantonia |
Imantonia sp. RCC671 isolate ZZ0013574 18S ribosomal RNA gene, partial sequence |
KT860885 |
18S rRNA |
nucleus |
Prasinoderma coloniale |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Prasinococcales; Prasinoderma |
Prasinoderma coloniale strain RCC672 isolate ZZ0045327 18S ribosomal RNA gene, partial sequence |
KT860886 |
18S rRNA |
nucleus |
Prasinoderma coloniale |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Prasinococcales; Prasinoderma |
Prasinoderma coloniale strain RCC673 isolate ZZ0045328 18S ribosomal RNA gene, partial sequence |
KT860887 |
18S rRNA |
nucleus |
Ostreococcus 'lucimarinus' |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus |
Ostreococcus 'lucimarinus' strain RCC675 isolate ZZ0045329 18S ribosomal RNA gene, partial sequence |
KT860888 |
18S rRNA |
nucleus |
Micromonas pusilla |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas |
Micromonas pusilla strain RCC676 isolate ZZ0045330 18S ribosomal RNA gene, partial sequence |
KU244654 |
ITS rRNA |
nucleus |
Micromonas sp. RCC676 |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas |
Micromonas sp. RCC676 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence |
KU244653 |
18S rRNA |
nucleus |
Micromonas sp. RCC676 |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas |
Micromonas sp. RCC676 18S ribosomal RNA gene, partial sequence |
JX660989 |
18S rRNA |
nucleus |
Phaeocystis sp. JD-2012 |
Eukaryota; Haptophyceae; Phaeocystales; Phaeocystaceae; Phaeocystis |
Phaeocystis sp. JD-2012 culture-collection RCC:RCC676 18S ribosomal RNA gene, partial sequence |
JX660955 |
psbA |
plastid |
Phaeocystis sp. JD-2012 |
Eukaryota; Haptophyceae; Phaeocystales; Phaeocystaceae; Phaeocystis |
Phaeocystis sp. JD-2012 culture-collection RCC:RCC678 photosystem II protein D1 (psbA) gene, partial cds; chloroplast |
JX660939 |
28S rRNA |
nucleus |
Phaeocystis sp. JD-2012 |
Eukaryota; Haptophyceae; Phaeocystales; Phaeocystaceae; Phaeocystis |
Phaeocystis sp. JD-2012 culture-collection RCC:Rcc678 28S ribosomal RNA gene, partial sequence |
ERR3497205 |
Transcriptome |
|
Phaeocystis globosa |
|
|
KT860597 |
18S, ITS |
nucleus |
Bathycoccus prasinos |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus |
Bathycoccus prasinos strain RCC680 isolate ZZ0043419 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence |
KT860598 |
18S, ITS |
nucleus |
Bathycoccus prasinos |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus |
Bathycoccus prasinos strain RCC682 isolate ZZ0043420 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence |
KT860889 |
18S rRNA |
nucleus |
Picochlorum sp. RCC683 |
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Picochlorum |
Picochlorum sp. RCC683 isolate ZZ0045332 18S ribosomal RNA gene, partial sequence |
KT860890 |
18S rRNA |
nucleus |
Picochlorum sp. RCC684 |
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Picochlorum |
Picochlorum sp. RCC684 isolate ZZ0045333 18S ribosomal RNA gene, partial sequence |
KT860599 |
18S, ITS |
nucleus |
Bathycoccus prasinos |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus |
Bathycoccus prasinos strain RCC685 isolate ZZ0043421 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence |
KT860600 |
18S, ITS |
nucleus |
Bathycoccus prasinos |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus |
Bathycoccus prasinos strain RCC686 isolate ZZ0043422 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence |
KT860601 |
18S, ITS |
nucleus |
Bathycoccus prasinos |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus |
Bathycoccus prasinos strain RCC687 isolate ZZ0043423 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence |
KT860891 |
18S rRNA |
nucleus |
Micromonas pusilla |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas |
Micromonas pusilla strain RCC688 isolate ZZ0045334 18S ribosomal RNA gene, partial sequence |
KT860892 |
18S rRNA |
nucleus |
Picochlorum sp. RCC689 |
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Picochlorum |
Picochlorum sp. RCC689 isolate ZZ0045335 18S ribosomal RNA gene, partial sequence |
KU244656 |
ITS rRNA |
nucleus |
Micromonas sp. RCC692 |
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas |
Micromonas sp. RCC692 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence |