RCC4623

Cafeteria_roenbergensis

Distributed

Print

NB: Empty fields are hidden.

Please login or register to order strains

Login

Register

Exclusive Economic Zones (EEZs) are indicated on the map.

ABS compliance

Are users allowed to use this biological resource without applying for formal ABS authorization?
Yes - (D) No information on country of origin, resource sampled pre-NP
ABS = Access & Benefit Sharing according to the Nagoya Protocol (NP) to the Convention for Biological Diversity (find out more here)
ABS Clearing House EMBRC step by step guide
IDENTITY

Cafeteria_roenbergensis

Domain: 
Eukaryota
Division: 
Heterokontophyta
Class: 
Bicosoecophyceae
Order: 
Bicosoecales
Family: 
Cafeteriaceae
Genus: 
Cafeteria
Strain name: 
RCC970-E3
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell assemblage: 
solitary
Cell shape: 
coccoid / bean-shaped
Length: 
5.00
ORIGIN
Sampling ocean: 
Pacific Ocean
Sampling regional sea: 
South East Pacific
Sampling country: 
International waters
Sampling ecosystem: 
pelagic
Sampling cruise: 
Biosope
Sampling station: 
STB15
Sampling depth (m): 
100
Sampling date: 
Wednesday, November 24, 2004
Isolation by: 
Garczareck L. / Marie D.
Isolation method: 
Flow cytometry sorting / Serial dilution
CULTURE CONDITIONS
RCC medium: 
Rice
RCC temperature: 
20.00
RCC transfer period weeks: 
3.00
RCC light: 
0
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Thursday, February 18, 2016
Mother strain: 
RCC970
Sampling CTD: 
137
Sampling bottle: 
8
Sampling by: 
Garczareck L.
Isolation medium: 
K
Isolation light: 
10
Deposit to RCC date: 
Wednesday, October 28, 2015
Deposit to rcc by: 
Matthias Fischer
Purification date: 
Thursday, January 1, 2015
Purification by: 
Matthias Fischer

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genome link Genbank organism Description
VLTL00000000 Genome nucleus Link Cafeteria roenbergensis strain RCC970-E3 Cafeteria roenbergensis strain RCC970-E3, whole genome shotgun sequencing project

Associated references

Displaying 1 - 1 of 1
Hackl T, Martin R, Barenhoff K, Duponchel S, Heider D, Fischer MG.  2020.  Four high-quality draft genome assemblies of the marine heterotrophic nanoflagellate Cafeteria roenbergensis. Scientific Data. 7:29. PDF icon Download pdf (555.19 KB)