RCC287

Chloropicon_sieburthii

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  • W. Eikrem
  • W. Eikrem
  • W. Eikrem
  • W. Eikrem
  • W. Eikrem
  • W. Eikrem
  • W. Eikrem
  • W. Eikrem
  • W. Eikrem
  • W. Eikrem

Exclusive Economic Zones (EEZs) are indicated on the map.

ABS compliance

Are users allowed to use this biological resource without applying for formal ABS authorization?
Yes - (D) No information on country of origin, resource sampled pre-NP
ABS = Access & Benefit Sharing according to the Nagoya Protocol (NP) to the Convention for Biological Diversity (find out more here)
ABS Clearing House EMBRC step by step guide
IDENTITY

Chloropicon_sieburthii

Domain: 
Eukaryota
Division: 
Chlorophyta
Class: 
Chloropicophyceae
Order: 
Chloropicales
Family: 
Chloropicaceae
Genus: 
Chloropicon
Genus synonym: 
Clade_VIIA3
Remark: 
Clade_VIIA3
Strain name: 
NOUM15
Strain name synonyms: 
NOUM97015
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
coccoid
Length: 
2.50
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Pacific Ocean
Sampling regional sea: 
Equatorial Pacific
Sampling country: 
International waters
Sampling ecosystem: 
pelagic
Sampling cruise: 
Ebene
Sampling station: 
139
Sampling depth (m): 
120
Sampling date: 
Tuesday, February 10, 1998
Isolation by: 
Boulben S.
Isolation method: 
filtration+dilution
CULTURE CONDITIONS
RCC medium: 
K
RCC temperature: 
20.00
RCC transfer period weeks: 
3.00
RCC light: 
100
Remark: 
Single cell genome project with JGI. Unpublished genome and transcriptome sequence from Genoscope (PROMETHEUS project). TEM picture by Wenche Eikrem (nov 2001)
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Friday, October 15, 1999
Identification by: 
L. Guillou
Sampling CTD: 
139
Sampling bottle: 
7
Isolation growth temperature: 
26.00
Isolation medium: 
milieu PC
Isolation light: 
4
Deposit to RCC date: 
Tuesday, August 5, 1997
Deposit to rcc by: 
J. Blanchot

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
MF077490 ITS rRNA nucleus prasinophyte sp. RCC287 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes Prasinophyte sp. RCC287 strain NOUM15 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
MK085986 Genome plastid Chloropicon sieburthii Eukaryota; Viridiplantae; Chlorophyta; Chloropicophyceae; Chloropicales; Chloropicaceae; Chloropicon Chloropicon sieburthii culture RCC:287 chloroplast, complete genome
MK086003 Genome mitochondrion Chloropicon sieburthii Eukaryota; Viridiplantae; Chlorophyta; Chloropicophyceae; Chloropicales; Chloropicaceae; Chloropicon Chloropicon sieburthii culture RCC:287 mitochondrion, complete genome

Associated references

Displaying 1 - 4 of 4
Santos ALopes dos, Gourvil P, Tragin M, Noël M-H, Decelle J, Romac S, Vaulot D.  2017.  Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters. The ISME Journal. 11:512–528. PDF icon Download pdf (2.6 MB)
Turmel M, Santos ALopes dos, Otis C, Sergerie R, Lemieux C.  2019.  Tracing the evolution of the plastome and mitogenome in the chloropicophyceae uncovered convergent tRNA gene losses and a variant plastid genetic code. Genome Biology and Evolution. in press
Santos ALopes dos, Gourvil P, Rodriguez-Hernandez F, Garrido JLuis, Vaulot D.  2016.  Photosynthetic pigments of oceanic Chlorophyta belonging to prasinophytes clade VII. Journal of Phycology. 52:148–155. PDF icon Download pdf (979.53 KB)
Santos ALopes dos, Pollina T, Gourvil P, Corre E, Marie D, Garrido JLuis, Rodríguez F, Noël M-H, Vaulot D, Eikrem W.  2017.  Chloropicophyceae, a new class of picophytoplanktonic prasinophytes. Scientific Reports. 7:14019. PDF icon Download pdf (4.58 MB)