Roscoff Culture Collection

Marine Microalgae, Macroalgae, Protists, Bacteria and Viruses

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A

Fuller NJ, Campbell C, Allen DJ, Pitt FD, Le Gall F, Vaulot D, Scanlan DJ. 2006. Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids. Aquatic Microbial Ecology. 43:79–93.

Fuller et al_2006_Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the.pdf (427.42 KB)

Trefault N, de la Iglesia R, Moreno-Pino M, Santos ALopes dos, Ribeiro CGérikas, Parada-Pozo G, Cristi A, Marie D, Vaulot D. 2021. Annual phytoplankton dynamics in coastal waters from fildes bay, western antarctic peninsula. Scientific Reports. 11:1368.

Trefault et al. - Annual phytoplankton dynamics in coastal waters from Fildes Bay, Western Antarctic Peninsula.pdf (1.35 MB)

B

Kuwata A, Yamada K, Ichinomiya M, Yoshikawa S, Tragin M, Vaulot D, Santos ALopes dos. 2018. Bolidophyceae, a sister picoplanktonic group of diatoms – a review. Frontiers in Marine Science. 5:370.

Kuwata et al_2018_Bolidophyceae, a sister picoplanktonic group of diatoms – a review.pdf (8.84 MB)

C

Santos ALopes dos, Pollina T, Gourvil P, Corre E, Marie D, Garrido JLuis, Rodríguez F, Noël M-H, Vaulot D, Eikrem W. 2017. Chloropicophyceae, a new class of picophytoplanktonic prasinophytes. Scientific Reports. 7:14019.

Lopes dos Santos et al_2017_Chloropicophyceae, a new class of picophytoplanktonic prasinophytes.pdf (4.58 MB)

Fuller NJ, Marie D, Partensky F, Vaulot D, Post AF, Scanlan DJ. 2003. Clade-specific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Sea. Applied and Environmental Microbiology. 69:2430–2443.

Fuller et al_2003_Clade-specific 16S ribosomal DNA oligonucleotides reveal the predominance of a.pdf (1.03 MB)

Romari K, Vaulot D. 2004. Composition and temporal variability of picoeukaryote communities at a coastal site of the English Channel from 18S rDNA sequences. 49:784–798.

Romari_Vaulot_2004_Composition and temporal variability of picoeukaryote communities at a coastal.pdf (393.52 KB)

Balzano S, Marie D, Gourvil P, Vaulot D. 2012. Composition of the summer photosynthetic pico and nanoplankton communities in the Beaufort Sea assessed by T-RFLP and sequences of the 18S rRNA gene from flow cytometry sorted samples. The ISME journal. 6:1480–1498.

Balzano et al_2012_Composition of the summer photosynthetic pico and nanoplankton communities in.pdf (1.01 MB)

Ribeiro CGérikas, Santos ALopes dos, Gourvil P, Le Gall F, Marie D, Tragin M, Probert I, Vaulot D. 2020. Culturable diversity of Arctic phytoplankton during pack ice melting. Elementa: Science of the Anthropocene. 8:6.

Ribeiro et al_2020_Culturable diversity of Arctic phytoplankton during pack ice melting.pdf (6.82 MB)

D

Edvardsen B, Egge ESirnaes, Vaulot D. 2016. Diversity and distribution of haptophytes revealed by environmental sequencing and metabarcoding – a review. Perspectives in Phycology. 3:77–91.

Edvardsen et al_2016_Diversity and distribution of haptophytes revealed by environmental sequencing.pdf (335.47 KB)

Ichinomiya M, A Santos Ldos, Gourvil P, Yoshikawa S, Kamiya M, Ohki K, Audic S, de Vargas C, Vaulot D, Kuwata A. 2016. Diversity and oceanic distribution of Parmales (Bolidophyceae), a picoplankton group closely related to diatoms. The ISME Journal. in press

Ichinomiya et al. - Diversity and oceanic distribution of Parmales (Bolidophyceae), a picoplankton group closely related to diatoms.pdf (756.64 KB)

Santos ALopes dos, Gourvil P, Tragin M, Noël M-H, Decelle J, Romac S, Vaulot D. 2017. Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters. The ISME Journal. 11:512–528.

Lopes dos Santos et al_2017_Diversity and oceanic distribution of prasinophytes clade VII, the dominant.pdf (2.6 MB)

Balzano S, Gourvil P, Siano R, Chanoine M, Marie D, Lessard S, Sarno D, Vaulot D. 2012. Diversity of cultured photosynthetic flagellates in the North East Pacific and Arctic Oceans in summer. Biogeosciences. 9:4553–4571.

Balzano et al_2012_Diversity of cultured photosynthetic flagellates in the North East Pacific and.pdf (6.19 MB)

Vaulot D, Eikrem W, Viprey M, Moreau H. 2008. The diversity of small eukaryotic phytoplankton (¡3 µm) in marine ecosystems. 32:795–820.

Vaulot et al_2008_The diversity of small eukaryotic phytoplankton (¡3 µm) in marine ecosystems.pdf (1.41 MB)

E

Stern RF, Andersen RA, Jameson I, Küpper FC, Coffroth M-A, Vaulot D, Le Gall F, Veron B, Brand JJ, Skelton H et al.. 2012. Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate dinoflagellate barcode marker. PLoS ONE. 7:e42780.

Stern et al_2012_Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate.pdf (1.05 MB)

H

Magalhães K, Santos ALopes dos, Vaulot D, de Oliveira MCabral. 2021. Hemiselmis aquamarina sp . nov . (Cryptomonadales , Cryptophyceae), a cryptomonad with a novel phycobiliprotein type (Cr-PC 564). Protist. in press

Magalhaes et al_2021_Hemiselmis aquamarina sp.pdf (3.8 MB)

I

Marie D, Le Gall F, Edern R, Gourvil P, Vaulot D. 2017. Improvement of phytoplankton culture isolation using single cell sorting by flow cytometry. Journal of Phycology. 53:271–282.

Marie et al_2017_Improvement of phytoplankton culture isolation using single cell sorting by.pdf (267.95 KB)

L

Ota S, Vaulot D. 2012. Lotharella reticulosa sp. nov.: A highly reticulated network forming chlorarachniophyte from the mediterranean sea. Protist. 163:91–104.

Ota_Vaulot_2012_Lotharella reticulosa sp.pdf (2.15 MB)

M

Zhu F, Massana R, Not F, Marie D, Vaulot D. 2005. Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA gene. FEMS Microbiology Ecology. 52:79–92.

Zhu et al_2005_Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S.pdf (220.7 KB)

Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, Amaral-Zettler LA, E Armbrust V, Archibald JM, Bharti AK, Bell CJ et al.. 2014. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLoS biology. 12:e1001889.

Keeling et al_2014_The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP).pdf (353.97 KB)

Balzano S, Percopo I, Siano R, Gourvil P, Chanoine M, Marie D, Vaulot D, Sarno D. 2017. Morphological and genetic diversity of Beaufort Sea diatoms with high contributions from the Chaetoceros neogracilis species complex. Journal of Phycology. 53:161–187.

Balzano et al_2017_Morphological and genetic diversity of Beaufort Sea diatoms with high.pdf (3.54 MB)

N

Jimenez V, Burns JA, Le Gall F, Not F, Vaulot D. 2021. No evidence of Phago-mixotropy in Micromonas polaris (Mamiellophyceae), the Dominant Picophytoplankton Species in the Arctic. Journal of Phycology. 57:435–446.

Jimenez et al. - 2021 - No evidence of Phago-mixotropy in Micromonas polar.pdf (705.98 KB)

Partensky F, Six C, Ratin M, Garczarek L, Vaulot D, Probert I, Calteau A, Gourvil P, Marie D, Grébert T et al.. 2018. A novel species of the marine cyanobacterium Acaryochloris with a unique pigment content and lifestyle. Scientific Reports. 8:9142.

Partensky et al. - A novel species of the marine cyanobacterium Acaryochloris with a unique pigment content and lifestyle.pdf (5.32 MB)

P

Santos ALopes dos, Gourvil P, Rodriguez-Hernandez F, Garrido JLuis, Vaulot D. 2016. Photosynthetic pigments of oceanic Chlorophyta belonging to prasinophytes clade VII. Journal of Phycology. 52:148–155.

Lopes dos Santos et al_2016_Photosynthetic pigments of oceanic Chlorophyta belonging to prasinophytes clade.pdf (979.53 KB)

Decelle J, Romac S, Stern RF, Bendif EMahdi, Zingone A, Audic S, Guiry MD, Guillou L, Tessier D, Le Gall F et al.. 2015. PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy. Molecular Ecology Resources. 15:1435–1445.

Decelle et al_2015_PhytoREF.pdf (739.73 KB)

Morel A, Ahn Y.-W., Partensky F, Vaulot D, Claustre H. 1993. Prochlorococcus and Synechococcus: a comparative study of their size, pigmentation and related optical properties. Journal of Marine Research. 51:617–649.

Morel et al_1993_Prochlorococcus and Synechococcus.pdf (3.66 MB)

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