Marine Synechococcus

These strains are being characterized. Clade corresponds to 16S rRNA phylogeny.

This shortlist returns 581 RCC strains

Title Genus Strain name Clade Phenotype pigment Sampling ocean Sampling station Sampling depth (m) Distributed
RCC2528 Synechococcus TAK9802-Clonal subcluster 5.1 - clade IIa Syn type 3a Pacific Ocean 7
RCC2529 Synechococcus RS9901-Clonal subcluster 5.1 - clade IX Syn type 3b or 3d Indian Ocean 1
RCC2530 Synechococcus RS9908-Clonal subcluster 5.1 - clade IIa Syn type 3a Indian Ocean 10
RCC2531 Synechococcus M11.1-Clonal subcluster 5.1 - clade IIh Syn type 3d Atlantic Ocean 275
RCC2532 Synechococcus Biosope_211-Clonal subcluster 5.1 - clade Ia Syn type 3d Pacific Ocean UPW3 30
RCC2533 Synechococcus Biosope_199-Clonal subcluster 5.1 - clade CRD1 Syn type 3dA Pacific Ocean UPW1 5
RCC2534 Synechococcus Biosope_148 D3-Clonal subcluster 5.1 - clade CRD1 Syn type 3cA Pacific Ocean EGY4 40
RCC2535 Synechococcus WH8016-Clonal subcluster 5.1 - clade Ib Syn type 3aA Atlantic Ocean Woods Hole
RCC2536 Synechococcus A15-29-Clonal subcluster 5.1 - clade IIIb Syn type 3c Atlantic Ocean 8 15
RCC2553 Synechococcus RS9915 Clonal subcluster 5.1 - clade IIIa Syn type 3dB Indian Ocean 10
RCC2554 Synechococcus A15-60 Clonal subcluster 5.1 - clade VII Syn type 3c Atlantic Ocean 15 10
RCC2555 Synechococcus WH8101 Clonal subcluster 5.1 - clade VIII Syn type 1 Atlantic Ocean Woods Hole
RCC2556 Synechococcus A15-28 Clonal subcluster 5.1 - clade IIIb Syn type 3c Atlantic Ocean 8 15
RCC2567 Synechococcus PROSOPE_85-6-clonal subcluster 5.1 - clade XVI Syn type 3dA Mediterranean Sea 7 90
RCC2568 Synechococcus Biosope_141D-clonal subcluster 5.1 - clade Ic Syn type 3b Pacific Ocean EGY4 40
RCC2569 Synechococcus A15-11-clonal subcluster 5.1 - clade IIIa Syn type 3c Atlantic Ocean 4 58
RCC2570 Synechococcus MICROVIR 16CH_1-clonal subcluster 5.1 - clade IVa Syn type 3d Atlantic Ocean 16 10
RCC2571 Synechococcus MITS 9220 clonal subcluster 5.1 - clade CRD1 Syn type 3dA Pacific Ocean 0
RCC2673 Synechococcus CC9902 subcluster 5.1 - clade IVa Syn type 3dA Pacific Ocean 5
RCC3010 Synechococcus MICROVIR 16CR_2_clonal subcluster 5.1 - clade Ib Syn type 3a? Atlantic Ocean 16 10
RCC3011 Synechococcus MICROVIR 16CR_4-3_clonal subcluster 5.1 - clade IV Syn type 3a Atlantic Ocean 16 10
RCC3012 Synechococcus MICROVIR 16CR_4-4_clonal subcluster 5.1 - clade Ib Syn type 3a? Atlantic Ocean 16 10
RCC3013 Synechococcus MICROVIR 10CR_3_clonal subcluster 5.1 - clade IV Syn type 3a Atlantic Ocean 18 25
RCC3014 Synechococcus MICROVIR 10CR_4-4_clonal subcluster 5.1 - clade IV Syn type 3a? Atlantic Ocean 18 25
RCC4550 Synechococcus AMT 2014 FLG11-1 Atlantic Ocean 13 78
RCC4554 Synechococcus AMT 2014 FLG13-1 Atlantic Ocean 15 100
RCC4555 Synechococcus AMT 2014 FLG14-1 Atlantic Ocean 15 2
RCC4556 Synechococcus AMT 2014 FLG25-1 Atlantic Ocean 33 45
RCC4557 Synechococcus AMT 2014 FLG26-1 Atlantic Ocean 33 2
RCC4571 Synechococcus AMT 2014 FLG44-1 Atlantic Ocean 59 2
RCC4744 Synechococcus AMT23ST01_11 Atlantic Ocean 1 20
RCC4745 Synechococcus AMT23ST01_8 Atlantic Ocean 1 20
RCC4746 Synechococcus AMT23ST52_1 Atlantic Ocean 52 2
RCC4747 Synechococcus AMT23ST04_CTD6_2 Atlantic Ocean 4 2
RCC4754 Synechococcus AMT23ST01_10 Atlantic Ocean 1 20
RCC4755 Synechococcus AMT23ST01_2 subcluster 5.1 - clade Ia Atlantic Ocean 1 20
RCC4756 Synechococcus AMT23ST01_3 subcluster 5.1 - clade Ib Atlantic Ocean 1 20
RCC4757 Synechococcus AMT23ST01_5 Atlantic Ocean 1 20
RCC4758 Synechococcus AMT23ST01_6 Atlantic Ocean 1 2
RCC4759 Synechococcus AMT23ST01_7 Atlantic Ocean 1 2
RCC4760 Synechococcus AMT23ST04_1 subcluster 5.1 - clade IVa Atlantic Ocean 4 80
RCC4761 Synechococcus AMT23ST04_3 subcluster 5.1 - clade Ia Atlantic Ocean 4 80
RCC4762 Synechococcus AMT23ST08_4 Atlantic Ocean 8 2
RCC4763 Synechococcus AMT23ST09_5 Atlantic Ocean 9 2
RCC4764 Synechococcus AMT23ST21_1 Atlantic Ocean 21 2
RCC4765 Synechococcus AMT23ST22_3 Atlantic Ocean 22 80
RCC4766 Synechococcus AMT23ST24_1 subcluster 5.1 - clade Ia Atlantic Ocean 24 2
RCC4767 Synechococcus AMT23ST27_2 Atlantic Ocean 27 2
RCC4768 Synechococcus AMT23ST31_2 Atlantic Ocean 31 20
RCC4769 Synechococcus AMT23ST31_3 Atlantic Ocean 31 2

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