RCC696

Chloroparvula_sp_B2

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Yes - (D) No information on country of origin, resource sampled pre-NP
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IDENTITY

Chloroparvula_sp_B2

Domain: 
Eukaryota
Division: 
Chlorophyta
Class: 
Chloropicophyceae
Order: 
Chloropicales
Family: 
Chloropicaceae
Genus: 
Chloroparvula
Genus synonym: 
Clade_VIIB2
Remark: 
Clade_VIIB2
Strain name: 
IndianOcean_1-1
Strain name synonyms: 
NIES-3835
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
coccoid
Length: 
3.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Indian Ocean
Sampling country: 
International waters
Sampling ecosystem: 
pelagic
Sampling cruise: 
VANC10MV
Sampling station: 
14
Sampling depth (m): 
120
Sampling date: 
Thursday, May 29, 2003
Isolation by: 
Not F.
Isolation method: 
Filtration< 3µm
CULTURE CONDITIONS
RCC medium: 
K
RCC temperature: 
20.00
RCC transfer period weeks: 
3.00
RCC light: 
4
Remark: 
Transcriptome Genoscope - 02/2014.
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Tuesday, February 3, 2004
Identification method: 
sequence
Sampling CTD: 
9
Sampling bottle: 
13
Sampling by: 
Not F.
Isolation preculture number: 
1
Isolation growth temperature: 
24.00
Isolation medium: 
K/10
Purification date: 
Monday, August 4, 2003
Purification by: 
F.Le Gall
Purification method: 
Flow cytometry sorting

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
ERR3497237 Transcriptome Chloroparvula sp. RCC696
LN735439 16S rRNA plastid Prasinophyceae sp. RCC696 (clade 7X-B2) Eukaryota; Viridiplantae; Chlorophyta; prasinophytes Prasinophyceae sp. RCC696 (clade 7X-B2) chloroplast partial 16S rRNA gene, strain RCC 696
KT860688 18S rRNA nucleus prasinophyte sp. RCC696 (clade VIIB2) Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; prasinophyte clade VII; unclassified prasinophyte clade VII Prasinophyte sp. RCC696 (clade VIIB2) isolate ZZ0016372 18S ribosomal RNA gene, partial sequence
KU843577 18S rRNA nucleus prasinophyte sp. RCC696 (clade VIIB2) Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; prasinophyte clade VII; unclassified prasinophyte clade VII Prasinophyte sp. RCC696 (clade VIIB2) 18S ribosomal RNA gene, partial sequence
MF077492 ITS rRNA nucleus prasinophyte sp. RCC696 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; prasinophyte clade VII; unclassified prasinophyte clade VII Prasinophyte sp. RCC696 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence
MK085988 Genome plastid Chloroparvula sp. RCC696 Eukaryota; Viridiplantae; Chlorophyta; Chloropicophyceae; Chloropicales; Chloropicaceae; Chloroparvula; unclassified Chloroparvula Chloroparvula sp. RCC696 culture RCC:696 chloroplast, complete genome
MK085999 Genome mitochondrion Chloroparvula sp. RCC696 Eukaryota; Viridiplantae; Chlorophyta; Chloropicophyceae; Chloropicales; Chloropicaceae; Chloroparvula; unclassified Chloroparvula Chloroparvula sp. RCC696 culture RCC:696 mitochondrion, complete genome
ERR3497236 Transcriptome Chloroparvula sp. RCC696

Associated references

Displaying 1 - 3 of 3
Santos ALopes dos, Gourvil P, Tragin M, Noël M-H, Decelle J, Romac S, Vaulot D.  2017.  Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters. The ISME Journal. 11:512–528. PDF icon Download pdf (2.6 MB)
Turmel M, Santos ALopes dos, Otis C, Sergerie R, Lemieux C.  2019.  Tracing the evolution of the plastome and mitogenome in the chloropicophyceae uncovered convergent tRNA gene losses and a variant plastid genetic code. Genome Biology and Evolution. in press
Santos ALopes dos, Pollina T, Gourvil P, Corre E, Marie D, Garrido JLuis, Rodríguez F, Noël M-H, Vaulot D, Eikrem W.  2017.  Chloropicophyceae, a new class of picophytoplanktonic prasinophytes. Scientific Reports. 7:14019. PDF icon Download pdf (4.58 MB)