RCC5493

Chaetoceros_neogracilis

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IDENTITY

Chaetoceros_neogracilis

Domain: 
Eukaryota
Division: 
Heterokontophyta
Class: 
Mediophyceae
Order: 
Chaetocerotales
Family: 
Chaetocerotaceae
Genus: 
Chaetoceros
Clade: 
clade I
Strain name: 
GE_DV_AM_DIL_132
STATUS
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Lost date: 
Friday, December 15, 2017
MORPHOLOGY
Cell assemblage: 
chains short
Cell shape: 
cylindrical
Length: 
6.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Arctic Ocean
Sampling regional sea: 
Baffin Bay
Sampling country: 
Canada
Sampling substrate: 
water
Sampling water type: 
marine
Sampling ecosystem: 
pelagic
Sampling cruise: 
Green Edge Amundsen
Sampling station: 
G409
Sampling depth (m): 
11
Sampling date: 
Sunday, June 26, 2016
Isolation by: 
Vaulot D.
Isolation method: 
serial dilution
CULTURE CONDITIONS
RCC medium: 
L1
RCC temperature: 
4.00
RCC transfer period weeks: 
4.00
RCC light: 
100
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Thursday, October 26, 2017
Identification by: 
C. Ribeiro
Identification method: 
sequence
Sampling CTD: 
98
Sampling bottle: 
16
Sampling by: 
M. Tragin
Isolation growth temperature: 
4.00
Isolation light: 
100

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
MN833991 ITS rRNA nucleus Chaetoceros cf. neogracilis clade I Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Chaetocerotophycidae; Chaetocerotales; Chaetocerotaceae; Chaetoceros Chaetoceros cf. neogracilis clade I strain RCC5493 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
MH764937 18S rRNA nucleus Chaetoceros sp. RCC5493 Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Chaetocerotophycidae; Chaetocerotales; Chaetocerotaceae; Chaetoceros Chaetoceros sp. RCC5493 small subunit ribosomal RNA gene, partial sequence

Associated references

Displaying 1 - 1 of 1
Ribeiro CGérikas, Santos ALopes dos, Gourvil P, Le Gall F, Marie D, Tragin M, Probert I, Vaulot D.  2020.  Culturable diversity of Arctic phytoplankton during pack ice melting. Elementa: Science of the Anthropocene. 8:6. PDF icon Download pdf (6.82 MB)