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RCC287

Chloropicon_sieburthii

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No geolocalisation available for this strain.

ABS compliance

ABS = Access & Benefit Sharing according to the Nagoya Protocol to the Convention for Biological Diversity (find out more here)
ABS status: Compliant without conditions
ABS compliance details: No ABS permit needed : sampled pre-NP (no national legislation)
IDENTITY

Chloropicon_sieburthii

Domain: 
Eukaryota
Division: 
Chlorophyta
Class: 
Chloropicophyceae
Order: 
Chloropicales
Family: 
Chloropicaceae
Genus: 
Chloropicon
Genus synonym: 
Clade_VIIA3
Remark: 
Clade_VIIA3
Strain name: 
NOUM15
Strain name synonyms: 
NOUM97015
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
coccoid
Length: 
2.50
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Pacific Ocean
Sampling regional sea: 
Equatorial Pacific
Sampling ecosystem: 
pelagic
Sampling cruise: 
Ebene
Sampling station: 
139
Sampling depth (m): 
120
Sampling date: 
Tuesday, February 10, 1998
CULTURE CONDITIONS
RCC medium: 
K
RCC temperature: 
20.00
RCC transfer period weeks: 
3.00
RCC light: 
100
Remark: 
Single cell genome project with JGI. Unpublished genome and transcriptome sequence from Genoscope (PROMETHEUS project). TEM picture by Wenche Eikrem (nov 2001)

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
MF077490 ITS rRNA nucleus prasinophyte sp. RCC287 Eukaryota; Viridiplantae; Chlorophyta; prasinophytes Prasinophyte sp. RCC287 strain NOUM15 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
MK085986 Genome plastid Chloropicon sieburthii Eukaryota; Viridiplantae; Chlorophyta; Chloropicophyceae; Chloropicales; Chloropicaceae; Chloropicon Chloropicon sieburthii culture RCC:287 chloroplast, complete genome
MK086003 Genome mitochondrion Chloropicon sieburthii Eukaryota; Viridiplantae; Chlorophyta; Chloropicophyceae; Chloropicales; Chloropicaceae; Chloropicon Chloropicon sieburthii culture RCC:287 mitochondrion, complete genome

Associated references

Displaying 1 - 4 of 4
Lopes dos Santos A, Gourvil P, Tragin M, Noël M-H, Decelle J, Romac S, Vaulot D.  2016.  Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters. The ISME Journal. in press PDF icon Download pdf (2.6 MB)
Lopes dos Santos A, Gourvil P, Rodriguez-Hernandez F, Garrido JLuis, Vaulot D.  2016.  Photosynthetic pigments of oceanic Chlorophyta belonging to prasinophytes clade VII. Journal of Phycology. 52:148–155. PDF icon Download pdf (979.53 KB)
Lopes dos Santos A, Pollina T, Gourvil P, Corre E, Marie D, Garrido JLuis, Rodríguez F, Noël M-H, Vaulot D, Eikrem W.  2017.  Chloropicophyceae, a new class of picophytoplanktonic prasinophytes. Scientific Reports. 7:14019. PDF icon Download pdf (4.58 MB)
Turmel M, Santos ALopes dos, Otis C, Sergerie R, Lemieux C.  2019.  Tracing the Evolution of the Plastome and Mitogenome in the Chloropicophyceae Uncovered Convergent tRNA Gene Losses and a Variant Plastid Genetic Code. Genome Biology and Evolution. in press PDF icon Download pdf (3.28 MB)