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RCC2366

Synechococcus_sp

Distributed

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ABS compliance

ABS = Access & Benefit Sharing according to the Nagoya Protocol to the Convention for Biological Diversity (find out more here)

ABS status: Compliant without conditions
ABS compliance details: No ABS permit needed : sampled pre-NP (no national legislation)
IDENTITY

Synechococcus_sp

Domain: 
Bacteria
Division: 
Cyanophyta
Class: 
Cyanophyceae
Order: 
Synechococcales
Family: 
Synechococcaceae
Genus: 
Synechococcus
Clade: 
subcluster 5.1 - clade IIIa
Strain name: 
WH8103Syn Clonal
Strain name synonyms: 
WH8103
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
coccoid
Length: 
1.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Atlantic Ocean
Sampling country: 
International waters
Sampling cruise: 
Oceanus 92
Sampling date: 
Tuesday, March 17, 1981
Isolation by: 
Waterbury J.
CULTURE CONDITIONS
RCC medium: 
RCC temperature: 
22.00
RCC transfer period weeks: 
4.00
RCC light: 
100
Phenotype pigment: 
Syn type 3c'
Remark: 
PUB:PEB 1,10. Genome will be sequenced by Genoscope in 2011

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Genbank taxonomy Description
JF307573 petB WH8103
KF177901 CA4-B Synechococcus sp. WH 8103 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. WH 8103 CA4-B island genomic sequence
KF528771 cpeB Synechococcus sp. WH 8103 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. WH 8103 C-phycoerythrin class I subunit beta (cpeB) and C-phycoerythrin class I subunit alpha (cpeA) genes, complete cds
NZ_LN847356 Genome bacteria Synechococcus sp. WH 8103 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. WH 8103 genome assembly WH8103.1, chromosome : 1
KF177902 cpeY Synechococcus sp. WH 8103 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. WH 8103 phycoerythrobilin:Cys-82 alpha-phycoerythrin lyase CpeY subunit (cpeY) gene, complete cds
KF177903 mpeY Synechococcus sp. WH 8103 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. WH 8103 putative phycoerythrobilin:phycoerythrin II lyase (mpeY) gene, complete cds
KF528809 rpcB Synechococcus sp. WH 8103 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. WH 8103 R-phycocyanin II beta subunit (rpcB) and R-phycocyanin II alpha subunit (rpcA) genes, complete cds