You are here

Life-cycle modification in open oceans accounts for genome variability in a cosmopolitan phytoplankton

TitleLife-cycle modification in open oceans accounts for genome variability in a cosmopolitan phytoplankton
Publication TypeJournal Article
Year of Publication2015
Authorsvon Dassow P, John U, Ogata H, Probert I, Bendif EMahdi, Kegel JU, Audic S, Wincker P, Da Silva C, Claverie J-M, Doney S, Glover DM, Flores DMella, Herrera Y, Lescot M, Garet-Delmas M-J, de Vargas C
JournalThe ISME Journal
Volume9
Pagination1365–1377
ISSN1751-7362
Keywords2015, rcc, rcc1001, rcc1208, RCC1213, RCC1215, RCC1216, rcc1217: rcc4030, RCC1218, rcc1219, rcc1220, rcc1221, rcc1226, rcc1227, RCC1228, rcc1229, RCC1231, rcc1245, RCC1246, rcc1247, RCC1250, rcc1251, rcc1254, rcc1256, RCC1257, rcc1261, rcc1262, rcc1266, RCC1268, rcc1271, RCC1276, rcc1277, rcc174, rcc1812, rcc1813, rcc1814, rcc1815, rcc1816, rcc1817, rcc1818, rcc1819, rcc1820, rcc1821, rcc1822, rcc1823, rcc1824, rcc1825, rcc1826, rcc1827, rcc1828, rcc1829, rcc1830, rcc1831, rcc1832, rcc1833, rcc1838, rcc1840, rcc1843, rcc1845, rcc1846, rcc1848, rcc1849, rcc1850, rcc1853, rcc1856, rcc192, rcc2053, rcc4002, rcc502, rcc538, rcc651, rcc867, rcc868, rcc874, RCC904, rcc911, rcc914, rcc920, rcc948, rcc955, rcc956, rcc958, rcc962, rcc963, RCC{\_}to{\_}add, SBR{\_}Phyto{\_}EPPO
Abstract

Emiliania huxleyi is the most abundant calcifying plankton in modern oceans with substantial intraspecific genome variability and a biphasic life cycle involving sexual alternation between calcified 2N and flagellated 1N cells. We show that high genome content variability in Emiliania relates to erosion of 1N-specific genes and loss of the ability to form flagellated cells. Analysis of 185 E. huxleyi strains isolated from world oceans suggests that loss of flagella occurred independently in lineages inhabiting oligotrophic open oceans over short evolutionary timescales. This environmentally linked physiogenomic change suggests life cycling is not advantageous in very large/diluted populations experiencing low biotic pressure and low ecological variability. Gene loss did not appear to reflect pressure for genome streamlining in oligotrophic oceans as previously observed in picoplankton. Life-cycle modifications might be common in plankton and cause major functional variability to be hidden from traditional taxonomic or molecular markers.

URLhttp://www.nature.com/doifinder/10.1038/ismej.2014.221
DOI10.1038/ismej.2014.221